Figure 5 - full size

 

Figure 5.
Figure 5. Dimer structure. (a) Structure of the TthDEAD dimer found in the asymmetric unit of crystal form 2. The monomers are related by an approximate 2-fold (176.5°) rotation. Helices and β-strands are colored orange and blue, respectively. Much of the interface is created by an intermolecular 14-stranded β-sheet, which is an antiparallel arrangement of the parallel sheets in each monomer. (b) Rotation of the view in (a) by 90° around the horizontal axis to highlight additional interactions between the N termini, parts of the Q-motifs, and the α2 helices of both monomers. (c) Magnification of the TthDEAD dimer interface in the same orientation as in (a). The five hydrogen bonds between the β7 strands are shown as broken blue lines. Residues involved in van der Waals contacts are colored green (molecule A) and cyan (molecule B). (d) Superposition of the TthDEAD (colored) and MjaDEAD (grey) dimers. The first molecules of each dimer were aligned to highlight differences in the other monomers. The mode of dimerization is similar in both cases via β-strand 7 but the dimer interface is more extensive in TthDEAD. Note the difference in tilt between the monomers of each complex (arrow).

The above figure is reprinted by permission from Elsevier: J Mol Biol (2006, 361, 731-743) copyright 2006.