Figure 4 - full size

 

Figure 4.
Figure 4. Stereo images with details of the novel ligand-binding site in FluA. (A) 2F[o]-F[c] electron density for the bound fluorescein contoured at 1.0 , together with sidechains of residues closer than 3.8 Å. Amino acids that were mutated in FluA (cf. Fig. 1) are colored dark-green, whereas original residues of BBP are depicted in light-green. (B) The set of 16 randomly mutated sidechains in the FluA crystal structure with the complexed fluorescein. (C) Arrangement of positively charged residues at the entrance to the ligand pocket of FluA. The three characteristically arranged Arg side chains (see text) are colored dark-blue. Note that there is a considerable distance between Arg 95 - whose sidechain is well defined in the electron density - and the bound fluorescein along the view axis (distance between the guanidinium and carboxylate groups: 8.6 Å) such that no direct contact is formed.

The above figure is reprinted by permission from John Wiley & Sons, Inc.: Proteins (2003, 53, 121-129) copyright 2003.