Figure 4 - full size

 

Figure 4.
Figure 4. Surface Patches within the Concave Face of NgR(A) Space-filling model of the concave face showing the two surface clusters enriched in aromatic side chains that are coincident with the conservation analysis, and a very prominent acidic cavity situated at the periphery of the groove that likely mediates specificity contacts through hydrogen bonding (Trp, Phe, and Tyr in green; His in purple; acidic residues in yellow).(B) Hydrophobic patch #1 on the upper side of the concave surface, centered at Trp87, Phe63, and Ile85.(C) The acidic patch. Three aspartic acid side chains surround Ser113, forming a depressed acidic region.(D) Hydrophobic patch #2 on the lower side of the concave surface, centered at Phe184 and Leu208.(E) The hydrophobic cavity located at the LRRCT domain.(F) Crystallographic interaction utilizing the LRRCT hydrophobic cavity.

The above figure is reprinted by permission from Cell Press: Neuron (2003, 38, 177-185) copyright 2003.