Figure 3 - full size

 

Figure 3.
Stereo representations of the PCI–thrombin complex bridged by a 14-mer heparin chain. (A) The ribbon diagram is rotated 150° relative to the view shown in Fig. 1A to illustrate the alignment of the heparin-binding regions. A 14-mer heparin chain (green rods) is placed onto the modeled disaccharide to yield a bridged complex with fully occupied heparin-binding sites. (B) The electrostatic surface of the complex in the same orientation as in A reveals the continuous basic (blue) heparin-binding sites of thrombin (Upper) and PCI (Lower).