Figure 3 - full size

 

Figure 3.
Figure 3. Protein-DNA Contacts
Schematic diagram of protein-DNA contacts generated with NUCPLOT (Luscombe et al., 1997). Residues from ATF-2 are in red, c-Jun in dark red, IRF-3A and C in green, and IRF-7B and D in yellow. The RHR of p50 is in light blue, and that of RelA in dark blue. The core binding sites for each protein are indicated in the corresponding colors. Blue lines indicate hydrogen bonds, red lines, van der Waals contacts.

The above figure is reprinted from an Open Access publication published by Cell Press: Cell (2007, 129, 1111-1123) copyright 2007.