Figure 3 - full size

 

Figure 3.
Figure 3. Structural comparison of NMR and crystallographic LA-2 epitope maps. (a) Schematic of OspA. The view is nearly "end-on", with the C-terminal domain of the molecule in the foreground. The polypeptide backbone is shown as a worm tube with labeled N and C-terminal ends. The three contiguous regions recognized by LA-2 are identified by blue, green, and magenta shading, respectively, and labeled by loop number as defined in the main text. The positions of Ala208 and Ala215 are indicated by red C^a-C^b bonds. Strictly conserved Trp216 on b-strand 17 is shown in cyan for reference. (b) By-residue NMR-chemical-shift perturbation data mapped onto the OspA structure, with non-hydrogen atoms shown as spheres (color scheme as in Figure 2). (c) Crystallographic identification of the LA-2 epitope. OspA atoms are shaded using a color gradient by their minimum distance from LA-2 atoms. Red, <3.5 Å; orange-bright yellow, 3.5-7.0 Å; yellow-faint yellow, 7.0-10 Å; white/gray, >10 Å. In (b) and (c), the C^b atoms of Ala208 and Ala215 are indicated with asterisks.

The above figure is reprinted by permission from Elsevier: J Mol Biol (2000, 302, 1153-1164) copyright 2000.