Figure 2 - full size

 

Figure 2.
Figure 2. Stereo views of K63- and K48-linked ubiquitin chains. Upper panel: The extended K63-linked ubiquitin chain that runs through the di- and tri-ubiquitin crystals. Shown are surface representations for six monomers (three adjacent asymmetric units). Molecules occupying the distal position are colored blue and molecules in the proximal position are colored yellow. The proximal end of the chain is at the bottom of the figure, and the distal end at the top. On each molecule, the hydrophobic patch comprising residues Leu-8, Ile-44, and Val-70 is colored red. Lower panel: A tetramer of K48-linked ubiquitin molecules. Starting from the distal end and moving toward the proximal end of the chain, the monomers are colored cyan, magenta, blue, and yellow, respectively. The hydrophobic patch on each monomer is colored red, as in the upper panel.

The above figure is reprinted by permission from John Wiley & Sons, Inc.: Proteins (2009, 77, 753-759) copyright 2009.