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Figure 2.
Figure 2: Intermolecular hydrogen-bonding alignments in the T.
thermophilus Ago bound to a 21-base DNA guide strand. a,
Insertion of the 5'-phosphate of the DNA guide strand into the
binding pocket in the Mid domain. b, Positioning of stacked
3'-end residues 20 and 21 of the DNA guide strand into the
binding pocket in the PAZ domain. c, Positioning of stacked
residues 2 to 6 of the DNA guide strand, with emphasis on
intermolecular interactions. d, Positioning of stacked residues
6 to 10 and 11 of the DNA guide strand, with emphasis on
intermolecular interactions.
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