Figure 2 - full size

 

Figure 2.
Fig. 2. Isolated core alanines create holes in the coiled coil. Shown is a series of space-filling models of consecutive stretches of the structure, each one viewing the broad face of the coiled coil. The region from residue 141 to the C terminus of the fragment is well packed [average gap volume = 30 Å3 per residue pair (see Table 4, which is published as supporting information on the PNAS web site)] whereas that from residues 113-141 contains significant holes in the core (average gap volume = 67 Å3 per residue pair). The quality of the packing between the helices of the coiled coil relates to the sequential pattern of the sizes of the side chains at the interface between the helices (see Results and letters in Fig. 3).