Figure 2 - full size

 

Figure 2.
Figure 2. Overview of HSA structure and omit maps. (a) Structure of HSA-diazepam. The protein is colour-coded by subdomain using a scheme that is maintained throughout. The diazepam is depicted in space-filling representation colour-coded by atom-type: carbon, pink; oxygen, red; nitrogen, blue; chlorine, gr. The rotated view on the right shows drug site 2 in the same orientation as drug site 1 in (c). (b) F[o] -F[c] simulated annealing omit map calculated in CNS50 with the diazepam molecule omitted from the phasing model and contoured at 2.75s. (c) Structure of HSA-myristate-phenylbutazone. Fatty acid molecules and phenylbutazone are depicted in space-filling representation with carbon atoms coloured grey and mid-blue, respectively. (d) F[o] -F[c] simulated annealing omit map calculated with the phenylbutazone molecule omitted from the phasing model and contoured at 2.75s. All Figures were prepared using PyMol.55

The above figure is reprinted by permission from Elsevier: J Mol Biol (2005, 353, 38-52) copyright 2005.