Figure 2 - full size

 

Figure 2.
Figure 2: Stereo view of the active site of the PDE5 -sildenafil complex. Sildenafil is shown as a stick model with carbon atoms coloured yellow. Metal- and inhibitor-binding residues of PDE5 are shown as stick models with carbon atoms coloured white. The zinc (the bigger CPK model) and magnesium ions are shown in orange and green, respectively. The amide moiety of the pyrazolopyrimidinone group of sildenafil forms a bidentate hydrogen bond with the -amide group of Gln 817, which is well ordered by a hydrogen bond relay involving Gln 817 to Gln 775, Gln 775 to Ala 767 and Gln 775 to Trp 853. The model orientation is the same as in Fig. 1a.

The above figure is reprinted by permission from Macmillan Publishers Ltd: Nature (2003, 425, 98-0) copyright 2003.