Figure 1 - full size

 

Figure 1.
Figure 1. Crystal structures of serpins shown as ribbon representations. (a) The structure of antithrombin (PDB 1E05) shows the A-sheet of the serpin (red) with entry of the reactive loop (yellow) to P14. The crucial point of bifurcation of the sheet at the site of entry of P8 is circled in blue. As shown in b, A-sheet opening beyond P12 allows the insertion of the P8-P3 segment of the loop of another molecule (yellow) leading to polymer formation. Model based on the structure of a1-antichymotrypsin.28 (c) Antitrypsin can become polymerogenic through cleavage of the reactive loop as observed crystallographically.15^ and 16 The polymers are formed by sequential insertion of the C-terminal portion of the reactive loop of one molecule into the opened A-sheet of another. (d) Antithrombin is rendered polymerogenic by annealing of P14-P8/9 peptides (dark blue) to the top of the sheet, but additional annealing to P7-P4 of the peptide WMDF (light blue) blocks polymerisation.

The above figure is reprinted by permission from Elsevier: J Mol Biol (2004, 342, 931-941) copyright 2004.