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Pfam domain PF04542

Pfam domain PF04542

Pfam domain:   
  PF04542 - Sigma-70 region 2  

Below is the list of protein structures in the PDB containing Pfam domain PF04542.

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Structures in the PDB containing this domain: 72

  Pfam domain
architecture
UniProt
accession
UniProt id Protein name PDB structures
1.
Q8RIQ2 Q8RIQ2_FUSNN RNA polymerase sigma-H factor {ECO:0000313|EMBL:AAL93644.1}
3mzyA.
2.
Q3IYV6 RPOE_RHOS4 ECF RNA polymerase sigma factor RpoE
2q1zA, 2z2sA.
3.
P0AGB6 RPOE_ECOLI ECF RNA polymerase sigma-E factor
1or7A, 2h27A.
 
C9R146 C9R146_ECOD1 RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}
2maoA, 2mapA.
 
Q0P6M2 Q0P6M2_ECOLX RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}
4lupA.
 
P37978 CNRH_RALME RNA polymerase sigma factor CnrH
4cxfA.
 
Q7AKG9 SIGR_STRCO ECF RNA polymerase sigma factor SigR
1h3lA.
 
Q9LA18 Q9LA18_STANO RNA polymerase sigma factor SigE {ECO:0000313|EMBL:AAF64399.1}
2cs9A.
4.
O67268 O67268_AQUAE RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}
1rp3A, 1sc5A.
 
O32728 O32728_GEOSE RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}
1l0oC.
5.
Q72L95 SIGA_THET2 RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}
1iw7F, 1smyF.
 
Q5SKW1 Q5SKW1_THET8 ococcus-Thermus
1zyrF, 2a68F, 2a69F, 2a6eF, 2a6hF, 2be5F, 2cw0F, 3dxjF, 3eqlF, 3wodF, 4g7hF, 4g7oF, 4g7zF, 4mq9F, 4oinF, 4oioF, 4oipF, 4oiqF, 4oirF, 4q4zF, 4q5sF.
 
Q9EZJ8 SIGA_THEAQ RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}
1ku2A, 1ku3A, 1ku7A, 1l9uH, 1l9zH, 1rioH, 3lesA, 3levA, 3n97A, 3ugoA, 3ugpA, 4gorA, 4ki2A.
6.
P0A0J0 SIGA_STAA8 RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}
4g6dA, 4g8xA, 4g94A.
 
P77994 SIGA_THEMA RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}
1ttyA, 2k6xA.
7.
Q0P6L9 Q0P6L9_ECOLX RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}
2p7vB.
 
P00579 RPOD_ECOLI RNA polymerase sigma factor RpoD {ECO:0000255|HAMAP-Rule:MF_00963}
1sigA, 1tlhB, 3iydF, 4igcX, 4jk1X, 4jk2X, 4jkrF, 4kmuX, 4kn4X, 4kn7X, 4ljzF, 4lk0F, 4lk1F, 4llgF, 4mexF, 4meyF.

List of Pfam domains

  Pfam code Pfam id Description
PF04542 Sigma70_r2 Sigma-70 region 2
PF00140 Sigma70_r1_2 Sigma-70 factor, region 1.2
PF03979 Sigma70_r1_1 Sigma-70 factor, region 1.1
PF04539 Sigma70_r3 Sigma-70 region 3
PF04545 Sigma70_r4 Sigma-70, region 4
PF04546 Sigma70_ner Sigma-70, non-essential region
PF08281 Sigma70_r4_2 Sigma-70, region 4

 

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