spacer
spacer

Pfam domain PF01590

Pfam domain PF01590

Pfam domain:   
  PF01590 - GAF domain  

Below is the list of protein structures in the PDB containing Pfam domain PF01590.

+/- Key to table

Structures in the PDB containing this domain: 204

  Pfam domain
architecture
UniProt
accession
UniProt id Protein name PDB structures
1.
Q74E48 Q74E48_GEOSL GAF domain protein, putative {ECO:0000313|EMBL:AAR34442.1}
3e0yA.
2.
Q8YLP5 Q8YLP5_NOSS1 Two-component response regulator {ECO:0000313|EMBL:BAB76950.1}
3p01A.
3.
C0QQ26 C0QQ26_PERMH Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACO03551.1}
4mcwA, 4mdzA, 4me4A.
4.
Q74CG9 Q74CG9_GEOSL GAF sensor methyl-accepting chemotaxis sensory transducer, class 40H {ECO:0000313|EMBL:AAR35082.1}
3oovA.
5.
Q8DLC7 Q8DLC7_THEEB Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:BAC08121.1}
2m7uA, 2m7vA, 3vv4A, 4fofA, 4glqA.
6.
O66591 O66591_AQUAE Transcriptional regulator (NifA family) {ECO:0000313|EMBL:AAC06546.1}
4g3kA, 4g3wA.
 
O67661 O67661_AQUAE Transcriptional regulator (NtrC family) {ECO:0000313|EMBL:AAC07620.1}
2m8gX, 4g3vA.
 
Q8KG60 Q8KG60_CHLTE Sigma-54-dependent transcriptional regulator {ECO:0000313|EMBL:AAM71356.1}
3k2nA.
7.
Q9KFE5 Q9KFE5_BACHD Histidine kinase {ECO:0000256|SAAS:SAAS00155883} (E.C. 2.7.13.3 {ECO:0000256|SAAS:SAAS00155883})
3o5yA.
 
Q38846 ERS1_ARATH Ethylene response sensor 1 (E.C. 2.7.11.-, 2.7.13.3)
4mt8A, 4mtxA.
8.
Q9I0R8 Q9I0R8_PSEAE Uncharacterized protein {ECO:0000313|EMBL:AAG05955.1}
3hvwA.
9.
Q6S996 Q6S996_LEIMA Class I phosphodiesterase PDEB1 {ECO:0000313|EMBL:AAR88146.1} (E.C. 3.1.4.17 {ECO:0000313|EMBL:AAR88146.1})
2r8qA.
 
Q8WQX9 Q8WQX9_9TRYP Class 1 phosphodiesterase PDEB1 {ECO:0000313|EMBL:AAK33016.1}
4i15A.
 
Q9Y233 PDE10_HUMAN cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A (E.C. 3.1.4.17, 3.1.4.35)
1lrbA, 2e4sA, 2ounA, 2oupA, 2ouqA, 2ourA, 2ousA, 2ouuA, 2ouvA, 2ouyA, 2weyA, 2y0jA, 2zmfA, 3sn7A, 3sniA, 3snlA, 3ui7A, 3uuoA, 3wi2A, 3ws8A, 3ws9A, 3wykA, 3wylA, 3wymA, 4aelA, 4ajdA, 4ajfA, 4ajgA, 4ajmA, 4bbxA, 4ddlA, 4dffA, 4fcbA, 4fcdA, 4heuA, 4hf4A, 4lkqA, 4lljA, 4llkA, 4llpA, 4llxA, 4lm0A, 4lm1A, 4lm2A, 4lm3A, 4lm4A, 4mrwA, 4mrzA, 4ms0A, 4msaA, 4mscA, 4mseA, 4mshA, 4msnA, 4muwA, 4mvhA, 4p0nA, 4p1rA, 4phwA, 4tpmA, 4tppA, 4wn1A.
 
Q8CG03 PDE5A_MOUSE cGMP-specific 3',5'-cyclic phosphodiesterase (E.C. 3.1.4.35)
2k31A.
 
Q9QYJ6 PDE10_RAT cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A (E.C. 3.1.4.17, 3.1.4.35)
2o8hA, 2ovvA, 2ovyA, 3hqwA, 3hqyA, 3hqzA, 3hr1A, 3lxgA, 3qpnA, 3qpoA, 3qppA.
 
O76074 PDE5A_HUMAN cGMP-specific 3',5'-cyclic phosphodiesterase (E.C. 3.1.4.35)
1rkpA, 1t9rA, 1t9sA, 1tbfA, 1udtA, 1uduA, 1uhoA, 1xozA, 1xp0A, 2chmA, 2h40A, 2h42A, 2h44A, 2xssA, 3b2rA, 3bjcA, 3hc8A, 3hdzA, 3jwqA, 3jwrA, 3lfvA, 3mf0A, 3shyA, 3shzA, 3sieA, 3tgeA, 3tggA, 3tseA, 3tsfA, 4g2wA, 4g2yA, 4i9zA, 4ia0A, 4md6A.
 
Q922S4 PDE2A_MOUSE cGMP-dependent 3',5'-cyclic phosphodiesterase (E.C. 3.1.4.17)
1mc0A.
10.
P51160 PDE6C_HUMAN Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' (E.C. 3.1.4.35)
3jwqA, 3jwrA.
11.
P52731 PDE6C_CHICK Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' (E.C. 3.1.4.35)
3dbaA.
12.
O00408 PDE2A_HUMAN cGMP-dependent 3',5'-cyclic phosphodiesterase (E.C. 3.1.4.17)
1z1lA, 3ibjA, 3itmA, 3ituA, 4c1iA, 4d08A, 4d09A, 4htxA, 4htzA, 4jibA.
13.
Q28156 PDE5A_BOVIN cGMP-specific 3',5'-cyclic phosphodiesterase (E.C. 3.1.4.35)
1fl4A.
14.
Q2JIZ5 Q2JIZ5_SYNJB Histidine kinase {ECO:0000256|SAAS:SAAS00155883} (E.C. 2.7.13.3 {ECO:0000256|SAAS:SAAS00155883})
2k2nA, 2kliA, 2koiA, 2lb5A, 2lb9A.
15.
Q9KHI5 Q9KHI5_SYNE7 Circadian input kinase {ECO:0000313|EMBL:AAF82192.1} (E.C. 2.7.3.- {ECO:0000313|EMBL:ABB56676.1})
2j48A.
 
P49333 ETR1_ARATH Ethylene receptor 1 (E.C. 2.7.13.3)
1dcfA, 4pl9A.
16.
A5U7E7 A5U7E7_MYCTA Two component sensor histidine kinase DevS {ECO:0000313|EMBL:ABQ74947.1}
2y8hA.
 
A0R2U9 A0R2U9_MYCS2 GAF family protein {ECO:0000313|EMBL:ABK70610.1}
2vjwA, 2vksA.
17.
P94182 P94182_9NOST Adenylate cyclase {ECO:0000313|EMBL:BAA13999.1} (E.C. 4.6.1.1 {ECO:0000313|EMBL:BAA13999.1})
1ykdA.
18.
Q83BF9 Q83BF9_COXBU Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:AAO91047.2} (E.C. 2.7.3.9 {ECO:0000313|EMBL:AAO91047.2})
3trcA.
 
Q6FEW8 Q6FEW8_ACIAD Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:CAG67390.1} (E.C. 2.7.3.9 {ECO:0000313|EMBL:CAG67390.1})
3ci6A.
19.
Q9RZA4 BPHY_DEIRA Bacteriophytochrome (E.C. 2.7.13.3)
1ztuA, 2o9bA, 2o9cA, 3s7nA, 3s7oA, 3s7pA, 3s7qA, 4cqhA, 4ijgA, 4o01A, 4o0pA, 4o8gA, 4q0hA, 4q0iA, 4q0jA.
20.
B3Q7C0 B3Q7C0_RHOPT Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ACF00254.1}
4ehoA, 4gw9A.
21.
P76016 DHAR_ECOLI PTS-dependent dihydroxyacetone kinase operon regulatory protein
4lrxC, 4lryC, 4lrzE.
22.
Q8YXY7 Q8YXY7_NOSS1 Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:BAB73026.1}
3w2zA.
23.
Q55168 PHY1_SYNY3 Phytochrome-like protein cph1 (E.C. 2.7.13.3)
2veaA, 3zq5A.
 
Q9HWR3 BPHY_PSEAE Bacteriophytochrome (E.C. 2.7.13.3)
3c2wA, 3g6oA, 3ibrA, 3nhqA, 3nopC, 3notC, 3nouC.
 
Q9X2W8 Q9X2W8_RHOCE PPH {ECO:0000313|EMBL:AAD22391.1}
1mzuA.
 
Q6N5G3 Q6N5G3_RHOPA Histidine kinase {ECO:0000256|SAAS:SAAS00155883} (E.C. 2.7.13.3 {ECO:0000256|SAAS:SAAS00155883})
4e04A.
 
Q6N5G2 Q6N5G2_RHOPA Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB2 {ECO:0000313|EMBL:CAE28457.1}
2oolA.
24.
Q55434 PHY2_SYNY3 Phytochrome-like protein cph2
4bwiA.
25.
Q9ZWQ6 Q9ZWQ6_ADICA PHY3 {ECO:0000313|EMBL:BAA36192.2}
1g28A, 1jnuA.
26.
O32393 O32393_ARTPT Adenylate cyclase {ECO:0000313|EMBL:BAA22997.1} (E.C. 4.6.1.1 {ECO:0000313|EMBL:BAA22997.1})
1wc0A, 1wc1A, 1wc3A, 1wc4A, 1wc5A, 1wc6A, 2bw7A.
27.
P14713 PHYB_ARATH Phytochrome B
4ourA.
28.
Q609M8 Q609M8_METCA Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:AAU92711.1}
3ewkA.

List of Pfam domains

  Pfam code Pfam id Description
PF01590 GAF GAF domain
PF00015 MCPsignal Methyl-accepting chemotaxis protein (MCP) signalling domain
PF00069 Pkinase Protein kinase domain
PF00072 Response_reg Response regulator receiver domain
PF00158 Sigma54_activat Sigma-54 interaction domain
PF00211 Guanylate_cyc Adenylate and Guanylate cyclase catalytic domain
PF00233 PDEase_I 3'5'-cyclic nucleotide phosphodiesterase
PF00360 PHY Phytochrome region
PF00391 PEP-utilizers PEP-utilising enzyme, mobile domain
PF00512 HisKA His Kinase A (phospho-acceptor) domain
PF00563 EAL EAL domain
PF00672 HAMP HAMP domain
PF00989 PAS PAS fold
PF00990 GGDEF GGDEF domain
PF01627 Hpt Hpt domain
PF01966 HD HD domain
PF02518 HATPase_c Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF02896 PEP-utilizers_C PEP-utilising enzyme, TIM barrel domain
PF02954 HTH_8 Bacterial regulatory protein, Fis family
PF05524 PEP-utilisers_N PEP-utilising enzyme, N-terminal
PF07730 HisKA_3 Histidine kinase
PF08446 PAS_2 PAS fold
PF13188 PAS_8 PAS domain
PF13426 PAS_9 PAS domain
PB000723
PB002641
PB014087
PB017249
PB059837
PB097518

 

spacer
spacer