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Pfam domain PF00905

Pfam domain PF00905

Pfam domain:   
  PF00905 - Penicillin binding protein transpeptidase domain  

Below is the list of protein structures in the PDB containing Pfam domain PF00905.

+/- Key to table

Structures in the PDB containing this domain: 183

  Pfam domain
architecture
UniProt
accession
UniProt id Protein name PDB structures
1.
D2XKK9 D2XKK9_ACIBA Class D beta-lactamase OXA-160 {ECO:0000313|EMBL:ADB28891.1}
4x53A, 4x56A.
 
Q51400 Q51400_PSEAI Beta-lactamase {ECO:0000256|RuleBase:RU361140} (E.C. 3.5.2.6 {ECO:0000256|RuleBase:RU361140})
1h5xA, 1h8yA, 1h8zA.
 
Q7WZC7 Q7WZC7_PSEAI Oxacillinase {ECO:0000313|EMBL:CAD58780.1} (E.C. 3.5.2.6 {ECO:0000313|EMBL:CAD58780.1})
4gn2A.
 
G5DE28 G5DE28_ACIBA Beta-lactamase OXA-225 {ECO:0000313|EMBL:AEP43731.1}
4x55A.
 
B6E129 B6E129_ACIBA OXA-146 carbapenemase {ECO:0000313|EMBL:ACI28281.1}
4k0wA.
 
Q8GRH0 Q8GRH0_PSEAI Beta-lactamase OXA-46 {ECO:0000313|EMBL:AFP97030.1}
3if6A.
 
Q6XL56 Q6XL56_FUSNU Class D beta-lactamase {ECO:0000313|EMBL:AAP69916.1}
4iedA.
 
P0A1V8 BLO2_SALTM Beta-lactamase OXA-2 (E.C. 3.5.2.6)
1k38A.
 
Q8RLA6 Q8RLA6_ACIBA Beta-lactamase OXA-33 {ECO:0000313|EMBL:AAL92496.1}
2jc7A, 3fv7A, 3fyzA, 3fzcA, 3g4pA, 3mbzA, 3paeA, 3pagA, 3zntA, 4f94A, 4wm9A.
 
Q6XEC0 Q6XEC0_KLEPN OXA-48 {ECO:0000313|EMBL:AAP70012.1}
3hbrA, 4s2jA, 4s2kA, 4s2nA, 4s2pA, 4wmcA.
 
P13661 BLO1_ECOLX Beta-lactamase OXA-1 (E.C. 3.5.2.6)
1m6kA, 3isgA, 4f7yA, 4mllA.
 
Q2TR58 Q2TR58_ACIBA Beta-lactamase OXA-58 {ECO:0000313|EMBL:ABD47674.1}
4oh0A.
 
Q7BNC2 Q7BNC2_ECOLX Beta-lactamase {ECO:0000313|EMBL:AHY82867.1}
3qnbA, 3qncA.
 
P14489 BLO10_PSEAI Beta-lactamase OXA-10 (E.C. 3.5.2.6)
1e3uA, 1e4dA, 1ewzA, 1fofA, 1k4eA, 1k4fA, 1k54A, 1k55A, 1k56A, 1k57A, 1k6rA, 1k6sA, 2hp5A, 2hp6A, 2hp9A, 2hpbA, 2rl3A, 2wgiA, 2wgvA, 2wgwA, 2wkhA, 2wkiA, 2x01A, 2x02A, 3lceA, 4s2oA.
 
Q9L4P2 Q9L4P2_ACIBA Beta-lactamase {ECO:0000313|EMBL:CAB69042.1}
4jf4A, 4jf5A, 4jf6A, 4k0xA.
2.
Q81ZZ3 Q81ZZ3_NITEU MrcA penicillin-binding 1 (Peptidoglycan synthetase) transmembrane protein {ECO:0000313|EMBL:CAD86229.1} (E.C. 2.4.2.- {ECO:0000313|EMBL:CAD86229.1})
3d0fA.
 
O70038 O70038_STREE Penicillin-binding protein 1B {ECO:0000313|EMBL:BAD00805.1}
2bg1A, 2bg3A, 2bg4A, 2fffB, 2jchA, 2jciA, 2je5A.
 
O66874 PBPA_AQUAE Penicillin-binding protein 1A (E.C. 2.4.2.-, 3.4.-.-)
2oqoA, 3d3hA, 3nb6A, 3nb7A.
 
Q7CRA4 Q7CRA4_STRR6 Penicillin-binding protein 1b {ECO:0000313|EMBL:AAL00711.1} (E.C. 2.3.2.- {ECO:0000313|EMBL:AAL00711.1}, 2.4.1.129 {ECO:0000313|EMBL:AAL00711.1})
2uwxA, 2uwyA, 2xd1A, 2xd5A, 2y2gA, 2y2hA, 2y2iA, 2y2jA, 2y2kA, 2y2lA, 2y2mA, 2y2nA, 2y2oA, 2y2pA, 2y2qA.
 
Q9RET4 Q9RET4_STREE Penicillin-binding protein 1A {ECO:0000313|EMBL:AAF17261.1}
2v2fA.
 
Q8KHY3 Q8KHY3_STAAU Penicillin-binding protein 2 {ECO:0000313|EMBL:AAM34717.1}
3dwkA.
 
Q4TUQ1 Q4TUQ1_STREE Penicillin-binding protein 1B {ECO:0000313|EMBL:AAY56815.1}
2fffA.
 
Q04707 PBPA_STRPN Penicillin-binding protein 1A
2zc5A, 2zc6A.
 
Q8Y547 Q8Y547_LISMO Lmo2229 protein {ECO:0000313|EMBL:CAD00307.1}
3zg7A, 3zg8A, 3zg9A, 3zgaA.
 
Q8DR59 PBPA_STRR6 Penicillin-binding protein 1A
2c5wA, 2c6wA.
 
Q9R744 Q9R744_STAAU PBP2 {ECO:0000313|EMBL:CAA76853.1}
2oluA, 2olvA.
3.
B0B6I9 B0B6I9_STREE Penicillin-binding protein 2B {ECO:0000313|EMBL:CAO91674.1}
2wadA, 2waeA.
 
C0VN42 C0VN42_9GAMM Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EEH67902.1} (E.C. 2.4.1.129 {ECO:0000313|EMBL:EEH67902.1})
3ue3A.
 
C8W9X3 C8W9X3_ATOPD Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ACV50911.1} (E.C. 2.4.1.129 {ECO:0000313|EMBL:ACV50911.1})
4ovdA.
 
A1A2F5 A1A2F5_BIFAA Peptidoglycan synthetase penicillin-binding protein 3 {ECO:0000313|EMBL:BAF39888.1}
4ye5A.
 
P0A3M6 PBP2_STRR6 Penicillin-binding protein 2B
2wafA.
 
G3XD46 G3XD46_PSEAE Penicillin-binding protein 3 {ECO:0000313|EMBL:AAG07806.1}
3pbrA, 3pbtA, 4kqoA, 4kqqA, 4kqrA.
 
Q51504 Q51504_PSEAI Penicillin-binding protein 3 {ECO:0000313|EMBL:CAA58872.1}
3oc2A, 3oclA, 3ocnA, 3pbnA, 3pboA, 3pbqA, 3pbsA, 4fsfA, 4l0lA.
 
P08149 PBP2_NEIGO Penicillin-binding protein 2
3equA, 3eqvA, 4u3tA.
4.
P12287 BLAR_BACLI Regulatory protein BlaR1
1nrfA.
 
P18357 BLAR_STAAU Regulatory protein BlaR1
1xa1A, 1xa7A, 1xkzA, 3q81A, 3q82A, 3uy6A.
 
P0A0B0 MECR_STAAN Methicillin resistance mecR1 protein
2iwbA, 2iwcA, 2iwdA.
 
Q7WU28 Q7WU28_STAAU Beta-lactamase regulatory protein BlaR1 {ECO:0000313|EMBL:AAQ17168.1}
3q7vA, 3q7zA.
5.
Q8NWC2 Q8NWC2_STAAW Penicillin-binding protein 3 {ECO:0000313|EMBL:BAB95369.1}
3vskA, 3vslA.
6.
G1C794 G1C794_ACIBA Penicillin-binding protein {ECO:0000313|EMBL:KHX50735.1}
3udfA, 3udiA, 3udxA, 3ue0A.
7.
B2I0J9 B2I0J9_ACIBC Membrane carboxypeptidase/penicillin-binding protein {ECO:0000313|EMBL:ACC58705.1}
3ue1A.
 
Q07806 PBPA_PSEAE Penicillin-binding protein 1A (E.C. 2.4.2.-, 3.4.-.-)
4oonA.
8.
C8WPP1 C8WPP1_EGGLE Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ACV56985.1} (E.C. 2.4.1.129 {ECO:0000313|EMBL:ACV56985.1})
4mnrA.
 
C8W8H7 C8W8H7_ATOPD Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ACV51768.1} (E.C. 2.4.1.129 {ECO:0000313|EMBL:ACV51768.1})
4jbfA, 4n1xA, 4qjgA, 4r0qA, 4r1gA, 4r23A, 4r3jA, 4ra7A.
9.
Q2PF50 Q2PF50_STAAU Penicillin binding protein 2' {ECO:0000313|EMBL:BAE75884.1}
1vqqA.
 
Q5HJW3 Q5HJW3_STAAC Penicillin-binding protein 2 {ECO:0000313|EMBL:AAW37420.1} (E.C. 3.4.16.4 {ECO:0000313|EMBL:AAW37420.1})
4dkiA.
 
Q54113 Q54113_STAAM Penicillin binding protein 2 prime {ECO:0000313|EMBL:BAB56203.1}
3zfzA, 3zg0A, 3zg5A, 4bl2A, 4bl3A, 4cjnA, 4cpkA.
 
Q93IC2 Q93IC2_STAAU Penicillin-binding protein 2' {ECO:0000313|EMBL:BAB47623.1}
1mwrA, 1mwsA, 1mwtA, 1mwuA.
10.
O34006 O34006_STREE Low-affinity penicillin-binding protein 2X {ECO:0000313|EMBL:AAC45547.1}
1k25A.
 
P59676 PBPX_STRR6 Penicillin-binding protein 2X
1pyyA.
 
P14677 PBPX_STRPN Penicillin-binding protein 2x
1pmdA, 1qmeA, 1qmfA, 1rp5A, 2z2lA, 2z2mA, 2zc3A, 2zc4A.
11.
P02919 PBPB_ECOLI Penicillin-binding protein 1B (E.C. 2.4.1.129, 3.4.-.-)
3fwlA, 3fwmA, 3vmaA.

List of Pfam domains

  Pfam code Pfam id Description
PF00905 Transpeptidase Penicillin binding protein transpeptidase domain
PF00912 Transgly Transglycosylase
PF01098 FTSW_RODA_SPOVE Cell cycle protein
PF03717 PBP_dimer Penicillin-binding Protein dimerisation domain
PF03793 PASTA PASTA domain
PF05223 MecA_N NTF2-like N-terminal transpeptidase domain
PF05569 Peptidase_M56 BlaR1 peptidase M56
PF14812 PBP1_TM Transmembrane domain of transglycosylase PBP1 at N-terminal
PF14814 UB2H Bifunctional transglycosylase second domain
PB001012
PB002264
PB029424

 

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