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Pfam domain PF00140

Pfam domain PF00140

Pfam domain:   
  PF00140 - Sigma-70 factor, region 1.2  

Below is the list of protein structures in the PDB containing Pfam domain PF00140.

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Structures in the PDB containing this domain: 92

  Pfam domain
architecture
UniProt
accession
UniProt id Protein name PDB structures
1.
P00579 RPOD_ECOLI RNA polymerase sigma factor RpoD {ECO:0000255|HAMAP-Rule:MF_00963}
1sigA, 1tlhB, 3iydF, 4jk1X, 4jk2X, 4jkrF, 4kmuX, 4kn4X, 4kn7X, 4ljzF, 4lk0F, 4lk1F, 4llgF, 4mexF, 4meyF, 4xsxF, 4xsyF, 4xszF, 4yfkF, 4yfnF, 4yfxF, 4yg2F, 4ylnF, 4yloF, 4ylpF, 4zh2F, 4zh3F, 4zh4F, 5uacF, 5uagF, 5uahF, 5uajF, 5ualF, 5uaqF.
 
Q0P6L9 Q0P6L9_ECOLX RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}
2p7vB.
2.
P0A0J0 SIGA_STAA8 RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}
4g6dA, 4g8xA, 4g94A.
 
P77994 SIGA_THEMA RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}
1ttyA, 2k6xA.
3.
A0QW02 A0QW02_MYCS2 RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963} (E.C. 1.11.1.15 {ECO:0000256|SAAS:SAAS00384259})
5tw1F.
 
P13445 RPOS_ECOLI RNA polymerase sigma factor RpoS {ECO:0000255|HAMAP-Rule:MF_00959}
5iplF, 5ipmF, 5ipnF.
 
Q5SKW1 Q5SKW1_THET8 RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}
1zyrF, 2a68F, 2a69F, 2a6eF, 2a6hF, 2be5F, 2cw0F, 3dxjF, 3eqlF, 3wodF, 4g7hF, 4g7oF, 4g7zF, 4mq9F, 4oinF, 4oioF, 4oipF, 4oiqF, 4oirF, 4q4zF, 4q5sF, 5e17F, 5e18F, 5i2dF.
 
Q72L95 SIGA_THET2 RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}
1iw7F, 1smyF, 5d4cF, 5d4dF, 5d4eF, 5tmcF, 5tmfF.
 
Q9EZJ8 SIGA_THEAQ RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}
1ku2A, 1ku3A, 1ku7A, 1l9uH, 1l9zH, 1rioH, 3lesA, 3levA, 3n97A, 3ugoA, 3ugpA, 4ki2A, 4xlnF, 4xlpF, 4xlqF, 4xlrF, 4xlsF.

List of Pfam domains

  Pfam code Pfam id Description
PF00140 Sigma70_r1_2 Sigma-70 factor, region 1.2
PF03979 Sigma70_r1_1 Sigma-70 factor, region 1.1
PF04539 Sigma70_r3 Sigma-70 region 3
PF04542 Sigma70_r2 Sigma-70 region 2
PF04545 Sigma70_r4 Sigma-70, region 4
PF04546 Sigma70_ner Sigma-70, non-essential region

 

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