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Pfam domain PF00128

Pfam domain PF00128

Pfam domain:   
  PF00128 - Alpha amylase, catalytic domain  

Below is the list of protein structures in the PDB containing Pfam domain PF00128.

+/- Key to table

Structures in the PDB containing this domain: 407

  Pfam domain
architecture
UniProt
accession
UniProt id Protein name PDB structures
1.
O06994 O16G1_BACSU Oligo-1,6-glucosidase 1 (E.C. 3.2.1.10)
4m56A, 4m8uA, 4mazA, 4mb1A.
 
P21332 O16G_BACCE Oligo-1,6-glucosidase (E.C. 3.2.1.10)
1uokA.
 
D0VX20 D0VX20_9GAMM Sucrose isomerase SmuA from Protaminobacter rubrum {ECO:0000313|PDB:3GBD} (E.C. 5.4.99.11 {ECO:0000313|PDB:3GBD})
3gbdA, 3gbeA.
 
A0R6E0 TRES_MYCS2 Trehalose synthase/amylase TreS (E.C. 3.2.1.1, 5.4.99.16)
3zo9A, 3zoaA.
 
A3DM60 A3DM60_STAMF Alpha amylase, catalytic region {ECO:0000313|EMBL:ABN69720.1}
4aeeA.
 
Q1J0W0 Q1J0W0_DEIGD Amylosucrase {ECO:0000313|EMBL:ABF44874.1}
3ucqA, 3uerA.
 
Q93I48 Q93I48_9BACI Amylase {ECO:0000313|EMBL:BAB71820.1}
1ud2A, 1ud3A, 1ud4A, 1ud5A, 1ud6A, 1ud8A.
 
B5ARZ9 B5ARZ9_THENE Alpha-amylase {ECO:0000313|EMBL:ACF75909.1}
4gklA.
 
Q33E90 Q33E90_9BACI Alpha-amylase {ECO:0000256|RuleBase:RU361134} (E.C. 3.2.1.1 {ECO:0000256|RuleBase:RU361134})
2ze0A.
 
P53051 MALX3_YEAST Oligo-1,6-glucosidase IMA1 (E.C. 3.2.1.10)
3a47A, 3a4aA, 3aj7A, 3axhA, 3axiA.
 
Q6UVM5 Q6UVM5_9XANT Sucrose hydrolase {ECO:0000313|EMBL:AAQ93678.1}
3czeA, 3czgA, 3czkA, 3czlA.
 
Q5SI17 Q5SI17_THET8 (Neo)pullulanase {ECO:0000313|EMBL:BAD71386.1}
2z1kA.
 
Q8KR84 Q8KR84_9ENTR Isomaltulose synthase {ECO:0000313|EMBL:AAK82938.1}
1m53A.
 
Q99040 DEXB_STRMU Glucan 1,6-alpha-glucosidase (E.C. 3.2.1.70)
2zicA, 2zidA.
 
G8N704 G8N704_GEOTH Alpha-amylase {ECO:0000313|EMBL:AEV18110.1}
4e2oA.
2.
P00691 AMY_BACSU Alpha-amylase (E.C. 3.2.1.1)
1bagA, 1ua7A.
3.
B8CZ54 B8CZ54_HALOH Alpha amylase {ECO:0000313|EMBL:ACL70573.1} (E.C. 3.2.1.98 {ECO:0000313|EMBL:ACL70573.1})
3bc9A, 3bcdA, 3bcfA.
4.
Q9RVT9 Q9RVT9_DEIRA Alpha-amlyase {ECO:0000313|EMBL:AAF10510.1}
4aysA.
5.
D9MPF2 D9MPF2_ERWRD Sucrose isomerase {ECO:0000313|EMBL:ADJ56407.2}
4howA, 4hoxA, 4hozA, 4hp5A, 4hphA.
6.
Q8A1G3 SUSG_BACTN Alpha-amylase SusG (E.C. 3.2.1.1)
3k8kA, 3k8lA, 3k8mA.
 
F9USZ1 F9USZ1_LACPL Alpha-amylase, maltodextrins and cyclomaltodextrins {ECO:0000313|EMBL:CCC77722.1} (E.C. 3.2.1.1 {ECO:0000313|EMBL:CCC77722.1})
3dhuA.
7.
H2N0D4 H2N0D4_ORYLA Alpha-amylase {ECO:0000256|RuleBase:RU361134} (E.C. 3.2.1.1 {ECO:0000256|RuleBase:RU361134})
3vm5A.
 
B3GQD0 B3GQD0_9BACI Alpha-amylase {ECO:0000256|RuleBase:RU361134} (E.C. 3.2.1.1 {ECO:0000256|RuleBase:RU361134})
3dc0A.
 
P04746 AMYP_HUMAN Pancreatic alpha-amylase (E.C. 3.2.1.1)
1b2yA, 1bsiA, 1cpuA, 1hnyA, 1kb3A, 1kbbA, 1kbkA, 1kguA, 1kgwA, 1kgxA, 1u2yA, 1u30A, 1u33A, 1xcwA, 1xcxA, 1xd0A, 1xd1A, 1xgzA, 1xh0A, 1xh1A, 1xh2A, 2cpuA, 2qmkA, 2qv4A, 3baiA, 3bajA, 3bakA, 3bawA, 3baxA, 3bayA, 3cpuA, 3ij7A, 3ij8A, 3ij9A, 3oldA, 3oleA, 3olgA, 3oliA, 4gqqA, 4gqrA, 4x9yA.
 
P04745 AMY1_HUMAN Alpha-amylase 1 (E.C. 3.2.1.1)
1c8qA, 1jxjA, 1jxkA, 1mfuA, 1mfvA, 1nm9A, 1q4nX, 1smdA, 1xv8A, 1z32X, 3blkA, 3blpX, 3dhpA.
 
Q8GPL8 Q8GPL8_9FIRM Alpha-amylase A {ECO:0000313|EMBL:AAN52525.1}
1wzaA.
 
P56634 AMY_TENMO Alpha-amylase (E.C. 3.2.1.1)
1clvA, 1jaeA, 1tmqA, 1viwA.
 
P29957 AMY_PSEHA Alpha-amylase (E.C. 3.2.1.1)
1aqhA, 1aqmA, 1b0iA, 1g94A, 1g9hA, 1jd7A, 1jd9A, 1kxhA, 1l0pA.
 
P00690 AMYP_PIG Pancreatic alpha-amylase (E.C. 3.2.1.1)
1bvnP, 1dhkA, 1hx0A, 1jfhA, 1kxqA, 1kxtA, 1kxvA, 1oseA, 1pifA, 1pigA, 1ppiA, 1ua3A, 1vahA, 1wo2A, 3l2lA, 3l2mA.
8.
P04063 AMY2_HORVU Alpha-amylase type B isozyme (E.C. 3.2.1.1)
1amyA, 1avaA, 1bg9A.
 
P17654 AMY1_ORYSJ Alpha-amylase (E.C. 3.2.1.1)
3wn6A.
 
P00693 AMY1_HORVU Alpha-amylase type A isozyme (E.C. 3.2.1.1)
1ht6A, 1p6wA, 1rp8A, 1rp9A, 1rpkA, 2qpsA, 2qpuA, 3bsgA, 3bshA.
9.
P06279 AMY_GEOSE Alpha-amylase (E.C. 3.2.1.1)
1hvxA, 4uzuA.
 
Q7LYT7 Q7LYT7_PYRWO Alpha amylase {ECO:0000313|EMBL:AAD54338.1} (E.C. 3.2.1.1 {ECO:0000313|EMBL:AAD54338.1})
1mwoA, 1mxdA, 1mxgA.
 
P06278 AMY_BACLI Alpha-amylase (E.C. 3.2.1.1)
1bliA, 1bplA, 1ob0A, 1vjsA.
 
O82839 O82839_BACSP Amylase {ECO:0000313|EMBL:BAA32431.1}
1w9xA, 2dieA.
 
P19571 AMT6_BACS7 Glucan 1,4-alpha-maltohexaosidase (E.C. 3.2.1.98)
1wp6A, 1wpcA, 2d3lA, 2d3nA, 2gjpA, 2gjrA.
 
P00692 AMY_BACAM Alpha-amylase (E.C. 3.2.1.1)
1e3xA, 1e3zA, 1e40A, 1e43A, 3bh4A.
 
O08452 O08452_9EURY Alpha amylase {ECO:0000313|EMBL:AAC45663.1} (E.C. 3.2.1.1 {ECO:0000313|EMBL:AAC45663.1})
1mwoA, 1mxdA, 1mxgA.
10.
P80099 MGTA_THEMA 4-alpha-glucanotransferase (E.C. 2.4.1.25)
1lwhA, 1lwjA.
11.
Q53688 Q53688_9CREN Glycosyltrehalose-producing enzyme {ECO:0000313|EMBL:BAA11009.1}
1iv8A.
 
Q973H2 Q973H2_SULTO Maltooligosyltrehalose synthase {ECO:0000313|EMBL:BAB65941.1} (E.C. 5.4.99.15 {ECO:0000313|EMBL:BAB65941.1})
3hjeA.
12.
Q84HQ2 Q84HQ2_BIFAD Sucrose phosphorylase {ECO:0000313|EMBL:AAO33821.1} (E.C. 2.4.1.7 {ECO:0000313|EMBL:AAO33821.1})
1r7aA, 2gduA, 2gdvA.
13.
P0C1B3 AMYA1_ASPOR Alpha-amylase A type-1/2 (E.C. 3.2.1.1)
2guyA, 2gvyA, 2taaA, 3kwxA, 3vx0A, 3vx1A, 6taaA, 7taaA.
 
P56271 AMYA_ASPNG Acid alpha-amylase (E.C. 3.2.1.1)
2aaaA.
14.
Q8P5I2 Q8P5I2_XANCP Amylosucrase or alpha amylase {ECO:0000313|EMBL:AAM42629.1}
2wpgA.
 
B2IUW9 B2IUW9_NOSP7 Alpha amylase, catalytic region {ECO:0000313|EMBL:ACC84362.1} (E.C. 3.2.1.54 {ECO:0000313|EMBL:ACC84362.1})
2wc7A, 2wcsA, 2wkgA.
 
Q5FMB7 Q5FMB7_LACAC Glucan 1,6-alpha-glucosidase {ECO:0000313|EMBL:AAV42157.1} (E.C. 3.2.1.70 {ECO:0000313|EMBL:AAV42157.1})
4aieA.
 
Q2PS28 Q2PS28_9PSED Sucrose isomerase {ECO:0000313|EMBL:ABC33903.1}
1zjaA, 1zjbA, 2pwdA, 2pweA, 2pwfA, 2pwgA, 2pwhA, 4go8A, 4go9A.
15.
Q59226 Q59226_BACSP Cyclomaltodextrinase {ECO:0000313|EMBL:AAA92925.1} (E.C. 3.2.1.54 {ECO:0000313|EMBL:AAA92925.1})
1ea9C.
 
Q60053 NEPU1_THEVU Neopullulanase 1 (E.C. 3.2.1.135)
1izjA, 1izkA, 1ji1A, 1uh2A, 1uh3A, 1uh4A, 2d0fA, 2d0gA, 2d0hA.
 
P38940 NEPU_GEOSE Neopullulanase (E.C. 3.2.1.135)
1j0hA, 1j0iA, 1j0jA, 1j0kA.
 
O69007 O69007_9DEIN Maltogenic amylase {ECO:0000313|EMBL:AAC15072.1}
1gviA, 1smaA.
16.
P10342 ISOA_PSEAY Isoamylase (E.C. 3.2.1.68)
1bf2A.
17.
Q9L1K2 GLGE1_STRCO Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1 (E.C. 2.4.99.16)
3zssA, 3zstA, 3zt5A, 3zt6A, 3zt7A, 4cn1A, 4cn4A, 4cn6A.
18.
Q9ZEU2 AMYS_NEIPO Amylosucrase (E.C. 2.4.1.4)
1g5aA, 1jg9A, 1jgiA, 1mvyA, 1mw0A, 1mw1A, 1mw2A, 1mw3A, 1s46A, 1zs2A, 3ueqA, 4floA, 4flqA, 4flrA, 4flsA.
19.
Q8TZP8 Q8TZP8_PYRFU Neopullulanase (Alpha-amylase II) {ECO:0000313|EMBL:AAL82063.1}
4aefA.
20.
Q7X8Q2 Q7X8Q2_CHLRE Isoamylase {ECO:0000313|EMBL:AAP85534.1}
4j7rA, 4okdA.
21.
O33838 O33838_THEMT Maltodextrin glycosyltransferase {ECO:0000313|EMBL:CAA04525.1}
1gjuA, 1gjwA.
22.
P15067 GLGX_ECOLI Glycogen debranching enzyme (E.C. 3.2.1.-)
2wskA.
23.
Q8ZPF0 Q8ZPF0_SALTY Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337} (E.C. 3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337})
3m07A.
24.
Q08751 NEPU2_THEVU Neopullulanase 2 (E.C. 3.2.1.135)
1bvzA, 1g1yA, 1jf5A, 1jf6A, 1ji2A, 1jibA, 1jl8A, 1vb9A, 1vfkA, 1vfmA, 1vfoA, 1vfuA, 1wzkA, 1wzlA, 1wzmA, 2d2oA, 3a6oA.
25.
P07762 GLGB_ECOLI 1,4-alpha-glucan branching enzyme GlgB (E.C. 2.4.1.18)
1gtyA, 1m7xA, 3o7yA, 3o7zA.
 
Q04446 GLGB_HUMAN 1,4-alpha-glucan-branching enzyme (E.C. 2.4.1.18)
4bzyA.
 
Q01401 GLGB_ORYSJ 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic (E.C. 2.4.1.18)
3amkA, 3amlA, 3vu2A.
 
P95868 P95868_SULSF Glycogen operon protein GlgX {ECO:0000313|EMBL:CAA69504.1}
2vncA, 2vr5A, 2vuyA.
26.
Q9S7S8 Q9S7S8_HORVU Limit dextrinase {ECO:0000313|EMBL:AAD34348.1} (E.C. 3.2.1.41 {ECO:0000313|EMBL:AAD34347.1})
2y4sA.
 
O48541 O48541_HORVU Limit dextrinase {ECO:0000313|EMBL:AAD04189.1}
2x4bA, 2x4cA, 2y5eA, 4aioA.
 
Q9FYY0 Q9FYY0_HORVU Limit dextrinase {ECO:0000313|EMBL:AAF98802.1}
4j3sA, 4j3tA, 4j3uA, 4j3vA, 4j3wA, 4j3xA.
27.
O33840 PULA_THEMA Pullulanase (E.C. 3.2.1.41)
2j71A, 2j72A, 2j73A.
28.
Q8KKG0 Q8KKG0_9FLAO Cyclomaltodextrinase {ECO:0000313|EMBL:CAD32957.1} (E.C. 3.2.1.54 {ECO:0000313|EMBL:CAD32957.1})
1h3gA, 3eddA, 3edeA, 3edfA, 3edjA, 3edkA.
29.
Q9KFR4 Q9KFR4_BACHD Alpha-amylase G-6 {ECO:0000313|EMBL:BAB04132.1}
2c3gA, 2c3hA, 2c3vA, 2c3wA, 2c3xA.
30.
C0SPA0 PULA_BACSU Pullulanase (E.C. 3.2.1.41)
2e8yA, 2e8zA, 2e9bA.
31.
P13507 AMT4_PSEST Glucan 1,4-alpha-maltotetraohydrolase (E.C. 3.2.1.60)
1gcyA, 1jdaA, 1jdcA, 1jddA, 1qi3A, 1qi4A, 1qi5A, 1qpkA, 2amgA.
32.
Q9RX51 TREZ_DEIRA Malto-oligosyltrehalose trehalohydrolase (E.C. 3.2.1.141)
2bhuA, 2bhyA, 2bhzA, 2bxyA, 2bxzA, 2by0A, 2by1A, 2by2A, 2by3A.
33.
P26827 CDGT_THETU Cyclomaltodextrin glucanotransferase (E.C. 2.4.1.19)
1a47A, 1ciuA, 3bmvA, 3bmwA.
 
P04830 CDGT1_PAEMA Cyclomaltodextrin glucanotransferase (E.C. 2.4.1.19)
3wmsA, 4jclA.
 
P31797 CDGT_GEOSE Cyclomaltodextrin glucanotransferase (E.C. 2.4.1.19)
1cygA.
 
P05618 CDGT_BACS0 Cyclomaltodextrin glucanotransferase (E.C. 2.4.1.19)
1d7fA, 1dedA, 1i75A, 1pamA, 1ukqA, 1uksA, 1uktA, 1v3jA, 1v3kA, 1v3lA, 1v3mA.
 
P19531 AMYM_GEOSE Maltogenic alpha-amylase (E.C. 3.2.1.133)
1qhoA, 1qhpA.
 
P43379 CDGT2_BACCI Cyclomaltodextrin glucanotransferase (E.C. 2.4.1.19)
1cdgA, 1cgvA, 1cgwA, 1cgxA, 1cgyA, 1cxeA, 1cxfA, 1cxhA, 1cxiA, 1cxkA, 1cxlA, 1d3cA, 1dij, , 1dtuA, 1eo5A, 1eo7A, 1kckA, 1kclA, 1ot1A, 1ot2A, 1pezA, 1pj9A, 1tcmA, 2cxgA, 2dijA.
 
P30920 CDGT1_BACCI Cyclomaltodextrin glucanotransferase (E.C. 2.4.1.19)
1cgtA, 1cguA, 3cgtA, 4cgtA, 5cgtA, 6cgtA, 7cgtA, 8cgtA, 9cgtA.
 
B9A1J6 B9A1J6_9BACL Cyclodextrin glucanotransferase {ECO:0000313|EMBL:BAH14968.1}
4jcmA.
34.
P21543 AMYB_PAEPO Beta/alpha-amylase (E.C. 3.2.1.2, 3.2.1.1)
2laaA, 2labA, 3vocA.
35.
Q55088 TREZ_SULSF Malto-oligosyltrehalose trehalohydrolase (E.C. 3.2.1.141)
1eh9A, 1ehaA, 3vgbA, 3vgdA, 3vgeA, 3vgfA, 3vggA, 3vghA.
36.
G9RIT4 G9RIT4_9ENTR Pullulanase {ECO:0000313|EMBL:EHL90178.1}
2fgzA, 2fh6A, 2fhbA, 2fhcA, 2fhfA.
 
P07811 PULA_ENTAE Pullulanase (E.C. 3.2.1.41)
2fh8A.
 
P07206 PULA_KLEPN Pullulanase (E.C. 3.2.1.41)
2yocA.
37.
P08195 4F2_HUMAN 4F2 cell-surface antigen heavy chain
2dh2A, 2dh3A.
38.
Q8KLP1 Q8KLP1_STRPY Pullulanase {ECO:0000313|EMBL:CAD32942.1} (E.C. 3.2.1.41 {ECO:0000313|EMBL:CAD32942.1})
2j43A.
39.
Q97SQ7 Q97SQ7_STRPN Putative alkaline amylopullulanase {ECO:0000313|EMBL:AAK74446.1}
2j44A, 2ya0A, 2ya1A, 2ya2A.
 
Q3DB05 Q3DB05_STRAG Reticulocyte binding protein {ECO:0000313|EMBL:EAO76676.1}
3fawA, 3faxA.

List of Pfam domains

  Pfam code Pfam id Description
PF00128 Alpha-amylase Alpha amylase, catalytic domain
PF00686 CBM_20 Starch binding domain
PF00746 Gram_pos_anchor Gram positive anchor
PF01373 Glyco_hydro_14 Glycosyl hydrolase family 14
PF01833 TIG IPT/TIG domain
PF02806 Alpha-amylase_C Alpha amylase, C-terminal all-beta domain
PF02903 Alpha-amylase_N Alpha amylase, N-terminal ig-like domain
PF02922 CBM_48 Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
PF03423 CBM_25 Carbohydrate binding domain (family 25)
PF03714 PUD Bacterial pullanase-associated domain
PF04650 YSIRK_signal YSIRK type signal peptide
PF07821 Alpha-amyl_C2 Alpha-amylase C-terminal beta-sheet domain
PF09071 Alpha-amyl_C Alpha-amylase, C terminal
PF09081 DUF1921 Domain of unknown function (DUF1921)
PF09083 DUF1923 Domain of unknown function (DUF1923)
PF09087 Cyc-maltodext_N Cyclomaltodextrinase, N-terminal
PF09154 DUF1939 Domain of unknown function (DUF1939)
PF09178 DUF1945 Domain of unknown function (DUF1945)
PF09196 DUF1953 Domain of unknown function (DUF1953)
PF09244 DUF1964 Domain of unknown function (DUF1964)
PF09260 DUF1966 Domain of unknown function (DUF1966)
PF10438 Cyc-maltodext_C Cyclo-malto-dextrinase C-terminal domain
PF11852 DUF3372 Domain of unknown function (DUF3372)
PF11896 DUF3416 Domain of unknown function (DUF3416)
PF11941 DUF3459 Domain of unknown function (DUF3459)
PB000411
PB003824
PB009370
PB012568
PB024289
PB024868
PB037925
PB039291
PB041554
PB044844
PB049088
PB056740
PB066507
PB093728
PB140170
PB212413
PB227186
PB384017
PB385605

 

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