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Pfam domain PF00084

Pfam domain PF00084

Pfam domain:   
  PF00084 - Sushi domain (SCR repeat)  

Below is the list of protein structures in the PDB containing Pfam domain PF00084.

+/- Key to table

Structures in the PDB containing this domain: 191

  Pfam domain
architecture
UniProt
accession
UniProt id Protein name PDB structures
1.
Q60819 I15RA_MOUSE Interleukin-15 receptor subunit alpha
2psmF.
2.
P01589 IL2RA_HUMAN Interleukin-2 receptor subunit alpha
1ilmA, 1ilnA, 1z92B, 2b5iD, 2erjA, 3iu3I, 3nfpI.
3.
P14151 LYAM1_HUMAN L-selectin
2lgfB, 3cfwA.
4.
P68638 VCP_VACCW Complement control protein C3
1g40A, 1g44A, 1ridA, 1vvcA, 1vvdA, 1vveA, 1y8eA.
 
P36980 FHR2_HUMAN Complement factor H-related protein 2
3zd1A.
 
P15529 MCP_HUMAN Membrane cofactor protein
1cklA, 1hr4A, 2o39C, 3inbC, 3l89M, 3o8eB.
 
P68639 VCP_VACCC Complement control protein C3
1e5gA.
 
P08174 DAF_HUMAN Complement decay-accelerating factor
1h03P, 1h04P, 1h2pP, 1h2qP, 1m11R, 1nwvA, 1ojvA, 1ojwA, 1ojyA, 1ok1A, 1ok2A, 1ok3A, 1ok9A, 1uotP, 1upnE, 2c8iE, 2qzdA, 2qzfA, 2qzhA, 3iypF, 3j24B.
5.
Q53HP3 Q53HP3_HUMAN Complement component 2 variant {ECO:0000313|EMBL:BAD96257.1}
2i6qA, 2odpA.
 
Q5JP69 Q5JP69_HUMAN Complement component 2, isoform CRA_b {ECO:0000313|EMBL:EAX03549.1}
2odqA.
 
P06681 CO2_HUMAN Complement C2 (E.C. 3.4.21.43)
2i6qA, 2i6sA, 2odpA, 2odqA, 3erbA.
6.
Q9UBS5 GABR1_HUMAN Gamma-aminobutyric acid type B receptor subunit 1
4mqfA, 4mr7A, 4mr8A, 4mr9A, 4mrmA, 4ms1A, 4ms3A, 4pasA.
 
Q9Z0U4 GABR1_RAT Gamma-aminobutyric acid type B receptor subunit 1
1srzA, 1ss2A.
7.
Q9DBX3 SUSD2_MOUSE Sushi domain-containing protein 2
2cqwA.
8.
Q64735 CR1L_MOUSE Complement component receptor 1-like protein
1ntlA.
 
Q03591 FHR1_HUMAN Complement factor H-related protein 1
3zd2A.
9.
P02749 APOH_HUMAN Beta-2-glycoprotein 1
1c1zA, 1g4fA, 1g4gA, 1qubA, 2kriA, 3op8A, 4jhsA.
10.
P00751 CFAB_HUMAN Complement factor B (E.C. 3.4.21.47)
1dleA, 1q0pA, 1rrkA, 1rs0A, 1rtkA, 2ok5A, 2winI, 2xwbF, 2xwjI, 3hrzD, 3hs0D.
11.
P09871 C1S_HUMAN Complement C1s subcomponent (E.C. 3.4.21.42)
1elvA, 1nziA, 4j1yA, 4lmfA, 4lorA, 4losA, 4lotA.
12.
P48740 MASP1_HUMAN Mannan-binding lectin serine protease 1 (E.C. 3.4.21.-)
3demA, 3govA, 4aqbA, 4djzA, 4igdA, 4iw4E, 4kkdA.
 
Q8CHN8 MASP1_RAT Mannan-binding lectin serine protease 1 (E.C. 3.4.21.-)
3pobA, 3poeA, 3pofA, 3pogA, 3poiA, 3pojA.
 
O00187 MASP2_HUMAN Mannan-binding lectin serine protease 2 (E.C. 3.4.21.104)
1q3xA, 1szbA, 1zjkA, 3tvjA, 4fxgG.
 
Q9JJS8 MASP2_RAT Mannan-binding lectin serine protease 2 (E.C. 3.4.21.104)
1nt0A.
13.
P00736 C1R_HUMAN Complement C1r subcomponent (E.C. 3.4.21.41)
1apqA, 1gpzA, 1md7A, 1md8A, 2qy0A.
14.
P10643 CO7_HUMAN Complement component C7
2wcyA.
15.
Q63135 CR1L_RAT Complement component receptor 1-like protein
1ntjA, 2xrbA, 2xrdA.
16.
P07897 PGCA_RAT Aggrecan core protein
1tdqB.
17.
P16581 LYAM2_HUMAN E-selectin
1eslA, 1g1tA, 4c16A, 4csyA.
18.
P04003 C4BPA_HUMAN C4b-binding protein alpha chain
2a55A, 4b0fA.
19.
P13671 CO6_HUMAN Complement component C6
3t5oA, 4a5wB.
20.
Q9BYH1 SE6L1_HUMAN Seizure 6-like protein
2yraA.
21.
P16112 PGCA_HUMAN Aggrecan core protein
4md4C.
22.
Q01102 LYAM3_MOUSE P-selectin
4gxbB.
23.
P16109 LYAM3_HUMAN P-selectin
1fsbA, 1g1qA, 1g1rA, 1g1sA.
24.
P20023 CR2_HUMAN Complement receptor type 2
1ghqB, 1ly2A, 1w2rA, 1w2sB, 2gsxA, 3oedC.
25.
P06909 CFAH_MOUSE Complement factor H
2ybyA.
26.
P08603 CFAH_HUMAN Complement factor H
1fhcA, 1haqA, 1hccA, 1hfhA, 1hfiA, 1kovA, 2bzmA, 2g7iA, 2ic4A, 2jgwA, 2jgxA, 2kmsA, 2qfgA, 2qfhA, 2rlpA, 2rlqA, 2uwnA, 2v8eA, 2w80A, 2w81A, 2wiiC, 2xqwC, 3gauA, 3gavA, 3gawA, 3kxvA, 3kzjA, 3oxuD, 3r62A, 3rj3D, 3sw0X, 4aydA, 4ayeA, 4ayiA, 4aymA, 4b2rA, 4b2sA, 4j38B, 4k12A, 4ontF.
27.
P17927 CR1_HUMAN Complement receptor type 1
1gkgA, 1gknA, 1gopA, 1ppqA, 2mcyA, 2mczA, 2q7zA.
28.
Q96PZ7 CSMD1_HUMAN CUB and sushi domain-containing protein 1
2ehfA.

List of Pfam domains

  Pfam code Pfam id Description
PF00084 Sushi Sushi domain (SCR repeat)
PF00003 7tm_3 7 transmembrane sweet-taste receptor of 3 GCPR
PF00008 EGF EGF-like domain
PF00057 Ldl_recept_a Low-density lipoprotein receptor domain class A
PF00059 Lectin_C Lectin C-type domain
PF00089 Trypsin Trypsin
PF00090 TSP_1 Thrombospondin type 1 domain
PF00092 VWA von Willebrand factor type A domain
PF00094 VWD von Willebrand factor type D domain
PF00193 Xlink Extracellular link domain
PF00431 CUB CUB domain
PF01033 Somatomedin_B Somatomedin B domain
PF01094 ANF_receptor Receptor family ligand binding region
PF01823 MACPF MAC/Perforin domain
PF03782 AMOP AMOP domain
PF07645 EGF_CA Calcium-binding EGF domain
PF07648 Kazal_2 Kazal-type serine protease inhibitor domain
PF07686 V-set Immunoglobulin V-set domain
PF09014 Sushi_2 Beta-2-glycoprotein-1 fifth domain
PF14670 FXa_inhibition Coagulation Factor Xa inhibitory site
PB004151
PB015364
PB016805
PB020370
PB020378
PB020741
PB071143

 

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