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Index of all ligands in the PDB

 I 

I . .

Part
code
I0.
I1.
I2.
I3.
I4.
I5.
I6.
I7.
I8.
I9.
IA.
IB.
IC.
ID.
IE.
IF.
IG.
IH.
II.
IJ.
IK.
IL.
IM.
IN.
IO.
IP.
IQ.
IR.
IS.
IT.
IU.
IV.
IW.
IX.
IY.
IZ.
Ligand Description No. of PDB
entries
IM1   (2r,4s,5s,1'S)-2-Phenylmethyl-4-Hydroxy-5-(Tert-Butoxycarbonyl)amino-6-Phenyl hexanoyl-N-(1'-
Imidazo-2-Yl)-2'-Methylpropanamide
  6
IM2   (5r)-5-[(1s,2r)-1-Formyl-2-Hydroxypropyl]-3-[(2-{[(E)-Iminomethyl]amino}ethyl)sulfanyl]-4,5-Dihydro-
1h-Pyrrole-2-Carboxylic acid
  15
IM3   (2e)-3-(3,4-Dihydroxyphenyl)-2-Iminopropanoic acid   1
IM4   (2e)-1-[(6-Chloropyridin-3-Yl)methyl]-N-Nitroimidazolidin-2-Imine   2
IM5   2-Amino-7-{[(3r,4r)-3-Hydroxy-4-(Hydroxymethyl)pyrrolidin-1-Yl]methyl}-3,5-Dihydro-4h-Pyrrolo[3,2-
D]pyrimidin-4-One
  4
IM6   4-Tert-Butyl-N-[6-(1h-Imidazol-1-Yl)imidazo[1,2-A]pyridin-2-Yl]benzamide   1
IM8   2-[1-(4-Chlorobenzoyl)-5-Methoxy-2-Methyl-1h-Indol-3-Yl]-N-[(1r)-1-(Hydroxymethyl)propyl]acetamide   1
IM9   2-{4-[4-({4-[2-Methyl-1-(1-Methylethyl)-1h-Imidazol-5-Yl]pyrimidin-2-Yl}amino)phenyl]piperazin-1-
Yl}-2-Oxoethanol
  1
IMA   [4-({[5-Benzyloxy-1-(3-Carbamimidoyl-Benzyl)-1h-Indole-2-Carbonyl]-Amino}-Methyl)-Phenyl]-Trimethyl-
Ammonium
  2
IMB   [(Isoquinolin-1-Ylamino)-Phosphono-Methyl]-Phosphonic acid   1
IMD   Imidazole   414
IMD-BCT   IMD=Imidazole, BCT=Bicarbonate ion.   2
IMD-BCT-HEM   IMD=Imidazole, BCT=Bicarbonate ion, HEM=Protoporphyrin IX containing fe.   1
IMD-FDE   IMD=Imidazole, FDE=Fe(III) deuteroporphyrin IX.   1
IMD-HEC   IMD=Imidazole, HEC=Heme c.   3
IMD-HEM   IMD=Imidazole, HEM=Protoporphyrin IX containing fe.   4
IMD-IMD   IMD=Imidazole.   1
IMD-IMD-HEM   IMD=Imidazole, HEM=Protoporphyrin IX containing fe.   2
IME   Tetra(imidazole)diaquacopper (ii)   3
IMF   Tetra(imidazole)diaquacopper (i)   1
IMG   1,4-Dideoxy-1,4-Imino-1-(S)-(9-Deazaguanin-9-Yl)-D-Ribitol   2
IMH   1,4-Dideoxy-4-Aza-1-(S)-(9-Deazahypoxanthin-9-Yl)-D-Ribitol   15
IMI   2-Iminobiotin   9
IMJ   (2e)-N-[(1,2-Dimethyl-1h-Indol-3-Yl)methyl]-N-Methyl-3-(7-Oxo-5,6,7,8-Tetrahydro-1,8-Naphthyridin-3-
Yl)prop-2-Enamide
  2
IMK   2-(Beta-D-Glucopyranosyl)-5-Methyl-1-Benzimidazole   1
IMM   1-(4-Iodobenzoyl)-5-Methoxy-2-Methyl indole-3-Acetic acid   2
IMN   Indomethacin   26
IMO   6-O-Phosphoryl inosine monophosphate   7
IMP   Inosinic acid   74
IMQ   (2r,3r,4s)-2-(Hydroxymethyl)-1-(Quinolin-8-Ylmethyl)pyrrolidine-3,4-Diol   1
IMR   Iminoribitol   1
IMS   2-[1-(4-Chlorobenzoyl)-5-Methoxy-2-Methyl-1h-Indol-3-Yl]-N-[(1s)-1-(Hydroxymethyl)propyl]acetamide   1
IMT-IMT-PYB-PYB-
ABU-PYB-PYB-PYB-
PYB-BAL-DIB
  IMT=4-Amino-(1-Methylimidazole)-2-Carboxylic acid, PYB=4-Amino-(1-Methylpyrrole)-2-Carboxylic acid, ABU=Gamma-Amino-Butanoic acid, BAL=Beta-Alanine, DIB=3-Amino-(Dimethylpropylamine).   1
IMT-PYB-IMT-PYB-
ABU-PYB-PYB-PYB-
PYB-BAL-DIB
  IMT=4-Amino-(1-Methylimidazole)-2-Carboxylic acid, PYB=4-Amino-(1-Methylpyrrole)-2-Carboxylic acid, ABU=Gamma-Amino-Butanoic acid, BAL=Beta-Alanine, DIB=3-Amino-(Dimethylpropylamine).   1
IMT-PYB-PYB-PYB-
ABU-PYB-PYB-PYB-
PYB-BAL-DIB
  IMT=4-Amino-(1-Methylimidazole)-2-Carboxylic acid, PYB=4-Amino-(1-Methylpyrrole)-2-Carboxylic acid, ABU=Gamma-Amino-Butanoic acid, BAL=Beta-Alanine, DIB=3-Amino-(Dimethylpropylamine).   1
IMU   Phosphoric acid mono-[5-(2-Amino-4-Oxo-4,5-Dihydro-3h-Pyrrolo[3,2-D]pyrimidin-7-Yl)-3,4-Dihydroxy-
Pyrrolidin-2-Ylmethyl] ester
  2
IMV   5-[(2-Oxo-2,3-Dihydro-1h-Indol-1-Yl)methyl]-1,3-Benzodioxole-4-Carboxylic acid   2
IMW   2-Methyl-5-(1-Methylethyl)cyclohexa-2,5-Diene-1,4-Dione   3
IMX   [(1r,2r)-2-{[(5-Fluoro-1h-Indol-2-Yl)carbonyl]amino}-2,3-Dihydro-1h-Inden-1-Yl]acetic acid   1
IMY   1-{[4,5-Bis(4-Chlorophenyl)-2-(2-Isopropoxy-4-Methoxyphenyl)-4,5-Dihydro-1h-Imidazol-1-
Yl]carbonyl}piperazine
  1
IMZ   Cis-[4,5-Bis-(4-Bromophenyl)-2-(2-Ethoxy-4-Methoxyphenyl)-4,5-Dihydroimidazol-1-Yl]-[4-(2-
Hydroxyethyl)piperazin-1-Yl]methanone
  1

Above is a listing of ligands in PDB beginning with the letter I and part-code IM. The column on the right shows the number of PDB entries containing the given ligand. Other part-codes for this letter are listed in the index on the left.

You can use the index at the top to get to ligands starting with different letters. A drop-down menu gives you access to any given part-code. Alternatively use the search box at top right to search for codes or names.

Note that leading spaces in ligand names (or in names of Het Groups within ligands) are replaced by an underscore, "_". The page labelled "_" on the far right of the index at the top includes all the metal ligands.

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