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Search ligand data 

Index of all ligands in the PDB

 D 

D . .

Part
code
D0.
D1.
D2.
D3.
D4.
D5.
D6.
D7.
D8.
D9.
DA.
DB.
DC.
DD.
DE.
DF.
DG.
DH.
DI.
DJ.
DK.
DL.
DM.
DN.
DO.
DP.
DQ.
DR.
DS.
DT.
DU.
DV.
DW.
DX.
DY.
DZ.
Ligand Description No. of PDB
entries
DS2   {4-[3-(4-{[(2r)-2-Hydroxy-3,3-Dimethylbutyl]oxy}-3-Methylphenyl)pentan-3-Yl]-2-
Methylphenoxy}acetic acid
  1
DS3   5-{4-[3-(4-{[(2r)-2-Hydroxy-3,3-Dimethylbutyl]oxy}-3-Methylphenyl)pentan-3-Yl]-2-
Methylphenoxy}pentanoic acid
  1
DS4   [3-Fluoro-2'-Methyl-4'-(3-{3-Methyl-4-[(1e)-4,4,4-Trifluoro-3-Hydroxy-3-(Trifluoromethyl)but-1-En-1-
Yl]phenyl}pentan-3-Yl)biphenyl-4-Yl]acetic acid
  1
DS5   (4s)-4-Hydroxy-5-[2-Methyl-4-(3-{3-Methyl-4-[4,4,4-Trifluoro-3-Hydroxy-3-(Trifluoromethyl)but-1-Yn-
1-Yl]phenyl}pentan-3-Yl)phenoxy]pentanoic acid
  1
DS6   (4s)-4-Hydroxy-5-[4-(3-{4-[(3s)-3-Hydroxy-4,4-Dimethylpentyl]-3-Methylphenyl}pentan-3-Yl)-2-
Methylphenoxy]pentanoic acid
  1
DSA   4-Hydroxy-8-Methyl-6-(4,5,6-Trimethoxy-1h-Indole-2-Carbonyl)-3,6,7,8-Tetrahydro-3,6-Diaza-As-
Indacene-2-Carboxylic acid methyl ester
  2
DSB   4,7-Dioxosebacic acid   4
DSC   Dodecanesulfonate ion   1
DSD   7-(Carboxyamino)-8-Amino-Nonanoic acid   4
DSE-DAL-GLY-02V-
ALA-TYR
  DSE=N-Methyl-D-Serine, DAL=D-Alanine, GLY=Glycine, 02V=(2s)-(3,4-Dihydroxyphenyl)(methylamino)ethanoic acid, ALA=Alanine, TYR=Tyrosine.   1
DSE-DAL-GLY-5PG-
ALA-TYR
  DSE=N-Methyl-D-Serine, DAL=D-Alanine, GLY=Glycine, 5PG=(2s)-(4-Hydroxyphenyl)(methylamino)ethanoic acid, ALA=Alanine, TYR=Tyrosine.   2
DSF   (2s)-2-(Difluoromethoxy)-1,1,1,2-Tetrafluoroethane   1
DSG-DLE-DGL-DLY-
DLE-DLE-DAR
  DSG=D-Asparagine, DLE=D-Leucine, DGL=D-Glutamic acid, DLY=D-Lysine, DAR=D-Arginine.   1
DSG-DTR-DTY-DAL-
DSG-DLE-DGL-DLY-
DLE-DLE-DAR
  DSG=D-Asparagine, DTR=D-Tryptophan, DTY=D-Tyrosine, DAL=D-Alanine, DLE=D-Leucine, DGL=D-Glutamic acid, DLY=D-Lysine, DAR=D-Arginine.   1
DSH   5'-S-(3-Aminopropyl)-5'-Thioadenosine   1
DSI   4-Hydroxy-6-(1h-Indole-2-Carbonyl)-8-Methyl-3,6,7,8-Tetrahydro-3,6-Diaza-As-Indacene-2-
Carboxylic acid methyl ester
  1
DSK   (2r,3s,4s)-1-[(2s,3s,4r,5r,6s)-2,3,4,5,6,7-Hexahydroxyheptyl]-3,4-Dihydroxy-2-
(Hydroxymethyl)tetrahydrothiophenium (non-Preferred name)
  1
DSL   Mono-Trans, Octa-Cis decaprenyl-Phosphate   1
DSM   3-(10,11-Dihydro-5h-Dibenzo[b,F]azepin-5-Yl)-N-Methylpropan-1-Amine   2
DSN   D-Serine   9
DSN-ALA-AHO-ORN-
DAS-AHO-SER
  DSN=D-Serine, ALA=Alanine, AHO=N-Acetyl-N-Hydroxy-L-Ornithine, ORN=L-Ornithine, DAS=D-Aspartic acid, SER=Serine.   1
DSN-ALA-N2C-MVA-
DSN-ALA-NCY-MVA
  DSN=D-Serine, ALA=Alanine, N2C=N,S-Dimethylcysteine, MVA=N-Methylvaline, NCY=N-Methylcysteine.   3
DSN-ALA-N2C-NCY-
MVA-DSN-ALA-NCY-
N2C-MVA
  DSN=D-Serine, ALA=Alanine, N2C=N,S-Dimethylcysteine, NCY=N-Methylcysteine, MVA=N-Methylvaline.   5
DSN-ALA-NCY-MVA-
DSN-ALA-NCY-MVA
  DSN=D-Serine, ALA=Alanine, NCY=N-Methylcysteine, MVA=N-Methylvaline.   3
DSN-ALA-NCY-VAL-
DSN-ALA-NCY-VAL
  DSN=D-Serine, ALA=Alanine, NCY=N-Methylcysteine, VAL=Valine.   1
DSN-ALA-NYB-CPC-
DSN-ALA-NCY-CPC
  DSN=D-Serine, ALA=Alanine, NYB=N-Methyl-S-[(1r)-1-Methylpropyl]-L-Cysteine, CPC=2-Methyl-1-Methylamino-Cyclopropane carboxylic acid, NCY=N-Methylcysteine.   1
DSN-ARG-DSN-FHO-
LYS-FHO-THR-THR
  DSN=D-Serine, ARG=Arginine, FHO=N^5^-Formyl-N^5^-Hydroxy-L-Ornithine, LYS=Lysine, THR=Threonine.   3
DSN-DAB-FHO-GLN-
DGN-FHO-GLY
  DSN=D-Serine, DAB=2,4-Diaminobutyric acid, FHO=N^5^-Formyl-N^5^-Hydroxy-L-Ornithine, GLN=Glutamine, DGN=D-Glutamine, GLY=Glycine.   1
DSN-LYS-GLY-FHO-
LYS-FH7-SER
  DSN=D-Serine, LYS=Lysine, GLY=Glycine, FHO=N^5^-Formyl-N^5^-Hydroxy-L-Ornithine, FH7=N^5^-Formyl-N^5^-Hydroxy-D-Ornithine, SER=Serine.   1
DSN-LYS-GLY-FHO-
SER-DSN-GLY-LYS-
FH7-SER
  DSN=D-Serine, LYS=Lysine, GLY=Glycine, FHO=N^5^-Formyl-N^5^-Hydroxy-L-Ornithine, SER=Serine, FH7=N^5^-Formyl-N^5^-Hydroxy-D-Ornithine.   1
DSN-LYS-GLY-FHO-
SER-DSN-GLY-ORN-
FH7-SER
  DSN=D-Serine, LYS=Lysine, GLY=Glycine, FHO=N^5^-Formyl-N^5^-Hydroxy-L-Ornithine, SER=Serine, ORN=L-Ornithine, FH7=N^5^-Formyl-N^5^-Hydroxy-D-Ornithine.   1
DSO   Adamantane-1-Carboxylic acid-5-Dimethylamino-Naphthalene-1-Sulfonylamino-Octyl-Amide   4
DSS   Methyl methylsulfinylmethyl sulfide   1
DST   Dimethylallyl s-Thiolodiphosphate   12
DSU   ((2r,3s,4s,5s)-3,4-Dihydroxy-5-(Hydroxymethyl)-5-((2r,3s,4s,5s,6r)-3,4,5-Trihydroxy-6-Methoxy-
Tetrahydro-2h-Pyran-2-Yloxy)-Tetrahydrofuran-2-Yl)methyl nonanoate
  3
DSV   N-(Dibenzo[b,D]thiophen-3-Ylsulfonyl)-L-Valine   1
DSZ   5'-O-(L-Alpha-Aspartylsulfamoyl)adenosine   3

Above is a listing of ligands in PDB beginning with the letter D and part-code DS. The column on the right shows the number of PDB entries containing the given ligand. Other part-codes for this letter are listed in the index on the left.

You can use the index at the top to get to ligands starting with different letters. A drop-down menu gives you access to any given part-code. Alternatively use the search box at top right to search for codes or names.

Note that leading spaces in ligand names (or in names of Het Groups within ligands) are replaced by an underscore, "_". The page labelled "_" on the far right of the index at the top includes all the metal ligands.

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