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Index of all ligands in the PDB

 B 

B . .

Part
code
B0.
B1.
B2.
B3.
B4.
B5.
B6.
B7.
B8.
B9.
BA.
BB.
BC.
BD.
BE.
BF.
BG.
BH.
BI.
BJ.
BK.
BL.
BM.
BN.
BO.
BP.
BQ.
BR.
BS.
BT.
BU.
BV.
BW.
BX.
BY.
BZ.
Ligand Description No. of PDB
entries
BG2   8-Bromoguanosine   1
BG3   3-Methyl-5-Sulfo-Pyrrolidine-2-Carboxylic acid   1
BG4   5-(Hydroxy-Methyl-Amino)-3-Methyl-Pyrrolidine-2-Carboxylic acid   1
BG5   5-Hydroxyamino-3-Methyl-Pyrrolidine-2-Carboxylic acid   1
BG6   Beta-D-Glucose-6-Phosphate   19
BGC   Beta-D-Glucose   192
BGC-BGC   BGC=Beta-D-Glucose.   30
BGC-BGC-BGC   BGC=Beta-D-Glucose.   14
BGC-BGC-BGC-ASO-
BGC-BGC-ASO
  BGC=Beta-D-Glucose, ASO=1,5-Anhydrosorbitol.   1
BGC-BGC-BGC-BGC   BGC=Beta-D-Glucose.   18
BGC-BGC-BGC-BGC-
BGC
  BGC=Beta-D-Glucose.   14
BGC-BGC-BGC-BGC-
BGC-BGC
  BGC=Beta-D-Glucose.   7
BGC-BGC-BGC-BGC-
BGC-BGC-BGC-BGC
  BGC=Beta-D-Glucose.   1
BGC-BGC-BGC-BGC-
BGC-BGC-BGC-BGC-
BGC
  BGC=Beta-D-Glucose.   1
BGC-BGC-BGC-BGC-
BGC-BGC-BGC-BGC-
BGC-BGC-BGC-BGC-
BGC-BGC-BGC-BGC-
BGC
  BGC=Beta-D-Glucose.   2
BGC-BGC-BGC-BGC-
BGC-BGC-BGC-BGC-
BGC-BGC-BGC-BGC-
BGC-BGC-BGC-BGC-
BGC-BGC
  BGC=Beta-D-Glucose.   1
BGC-BGC-BGC-BGC-
XYS
  BGC=Beta-D-Glucose, XYS=Xylopyranose.   1
BGC-BGC-BGC-BGC-
XYS-GAL-XYS
  BGC=Beta-D-Glucose, XYS=Xylopyranose, GAL=Beta-D-Galactose.   1
BGC-BGC-BGC-BGC-
XYS-GAL-XYS-GAL-
XYS
  BGC=Beta-D-Glucose, XYS=Xylopyranose, GAL=Beta-D-Galactose.   1
BGC-BGC-BGC-BGC-
XYS-XYS
  BGC=Beta-D-Glucose, XYS=Xylopyranose.   1
BGC-BGC-BGC-BGC-
XYS-XYS-XYS
  BGC=Beta-D-Glucose, XYS=Xylopyranose.   1
BGC-BGC-BGC-GLC   BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose.   2
BGC-BGC-BGC-GLC-
BGC-BGC
  BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose.   1
BGC-BGC-BGC-XYS-
XYS-GAL
  BGC=Beta-D-Glucose, XYS=Xylopyranose, GAL=Beta-D-Galactose.   1
BGC-BGC-BMA-BGC-
BMA-MAN-BMA
  BGC=Beta-D-Glucose, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose.   1
BGC-BGC-G2F-SHG   BGC=Beta-D-Glucose, G2F=2-Deoxy-2-Fluoro-Alpha-D-Glucopyranose, SHG=2-Deoxy-2-Fluoro-Beta-D-Glucopyranose.   1
BGC-BGC-G6D-BGC-
BGC-BGC-BGC
  BGC=Beta-D-Glucose, G6D=6-Deoxy-Alpha-D-Glucose.   1
BGC-BGC-GLC   BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose.   3
BGC-BGC-OXZ   BGC=Beta-D-Glucose, OXZ=Tetrahydrooxazine.   1
BGC-BGC-SGC-MGL   BGC=Beta-D-Glucose, SGC=4-Deoxy-4-Thio-Beta-D-Glucopyranose, MGL=O1-Methyl-Glucose.   1
BGC-BGC-SSG   BGC=Beta-D-Glucose, SSG=1,4-Deoxy-1,4-Dithio-Beta-D-Glucopyranose.   1
BGC-BGC-XYS-BGC-
BGC-BGC
  BGC=Beta-D-Glucose, XYS=Xylopyranose.   1
BGC-BGC-XYS-GAL-
BGC
  BGC=Beta-D-Glucose, XYS=Xylopyranose, GAL=Beta-D-Galactose.   2
BGC-BGC-ZZ1   BGC=Beta-D-Glucose, ZZ1=4-Methyl-2h-Chromen-2-One.   1
BGC-BMA   BGC=Beta-D-Glucose, BMA=Beta-D-Mannose.   2
BGC-CCN-IPH   BGC=Beta-D-Glucose, CCN=Acetonitrile, IPH=Phenol.   1
BGC-G2F   BGC=Beta-D-Glucose, G2F=2-Deoxy-2-Fluoro-Alpha-D-Glucopyranose.   1
BGC-G6D   BGC=Beta-D-Glucose, G6D=6-Deoxy-Alpha-D-Glucose.   1
BGC-GAL   BGC=Beta-D-Glucose, GAL=Beta-D-Galactose.   11
BGC-GAL-A2G-FUC-
FUC
  BGC=Beta-D-Glucose, GAL=Beta-D-Galactose, A2G=N-Acetyl-2-Deoxy-2-Amino-Galactose, FUC=Alpha-L-Fucose.   2
BGC-GAL-FUC   BGC=Beta-D-Glucose, GAL=Beta-D-Galactose, FUC=Alpha-L-Fucose.   3
BGC-GAL-GAL-SIA-
SIA-NGA
  BGC=Beta-D-Glucose, GAL=Beta-D-Galactose, SIA=O-Sialic acid, NGA=N-Acetyl-D-Galactosamine.   1
BGC-GAL-GLA   BGC=Beta-D-Glucose, GAL=Beta-D-Galactose, GLA=Alpha d-Galactose.   1
BGC-GAL-NAG   BGC=Beta-D-Glucose, GAL=Beta-D-Galactose, NAG=N-Acetyl-D-Glucosamine.   2
BGC-GAL-NAG-GAL   BGC=Beta-D-Glucose, GAL=Beta-D-Galactose, NAG=N-Acetyl-D-Glucosamine.   2
BGC-GAL-NAG-NAG   BGC=Beta-D-Glucose, GAL=Beta-D-Galactose, NAG=N-Acetyl-D-Glucosamine.   1
BGC-GAL-NAG-NAG-
GAL
  BGC=Beta-D-Glucose, GAL=Beta-D-Galactose, NAG=N-Acetyl-D-Glucosamine.   1
BGC-GAL-NGA-GAL-
SIA-SIA
  BGC=Beta-D-Glucose, GAL=Beta-D-Galactose, NGA=N-Acetyl-D-Galactosamine, SIA=O-Sialic acid.   1
BGC-GAL-NGA-GAL-
SIA-SLB-SIA
  BGC=Beta-D-Glucose, GAL=Beta-D-Galactose, NGA=N-Acetyl-D-Galactosamine, SIA=O-Sialic acid, SLB=5-N-Acetyl-Beta-D-Neuraminic acid.   2
BGC-GAL-NGA-GAL-
SIA-SLB-SIA-CEQ
  BGC=Beta-D-Glucose, GAL=Beta-D-Galactose, NGA=N-Acetyl-D-Galactosamine, SIA=O-Sialic acid, SLB=5-N-Acetyl-Beta-D-Neuraminic acid, CEQ=Ethyl-Trimethyl-Silane.   1
BGC-GAL-SIA   BGC=Beta-D-Glucose, GAL=Beta-D-Galactose, SIA=O-Sialic acid.   1
BGC-GLA   BGC=Beta-D-Glucose, GLA=Alpha d-Galactose.   1
BGC-GLC   BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose.   8
BGC-GLC-AC1-GLC-
GLC-GLC-AC1
  BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose, AC1=6-Methyl-5-(4,5,6-Trihydroxy-3-Hydroxymethyl-Cyclohex-2-Enylamino)-Tetrahydro-Pyran-2,3,4-Triol.   1
BGC-GLC-ACI-GLD-
GLC
  BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose, ACI=6-Amino-4-Hydroxymethyl-Cyclohex-4-Ene-1,2,3-Triol, GLD=4,6-Dideoxyglucose.   1
BGC-GLC-BGC-BGC-
BGC-XYS-XYS-XYS
  BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose, XYS=Xylopyranose.   2
BGC-GLC-BGC-BGC-
GLC-GLC-GLC-GLC-
GLC-GLC
  BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose.   1
BGC-GLC-DAF-GLC-
GLC-GLC-DAF
  BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose, DAF=4,6-Dideoxy-4-{[(1s,5r,6s)-3-Formyl-5,6-Dihydroxy-4-Oxocyclohex-2-En-1-Yl]amino}-Alpha-D-Xylo-Hex-5-
Enopyranose.
  1
BGC-GLC-GLC   BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose.   5
BGC-GLC-GLC-GLC   BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose.   6
BGC-GLC-GLC-GLC-
GLC
  BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose.   5
BGC-GLC-GLC-GLC-
GLC-GLC-GLC
  BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose.   3
BGC-GLO   BGC=Beta-D-Glucose, GLO=D-Glucose in linear form.   1
BGC-HBK   BGC=Beta-D-Glucose, HBK=(2s)-2,4-Dihydroxy-7-Methoxy-2h-1,4-Benzoxazin-3(4h)-One.   1
BGC-LGC-BGC   BGC=Beta-D-Glucose, LGC=(3s,4r,5r,6s)-3,4,5-Trihydroxy-6-(Hydroxymethyl)tetrahydro-2h-Pyran-2-One.   1
BGC-LXB-NGZ-GL0-
BGC-GLC-GXL
  BGC=Beta-D-Glucose, LXB=2-(Acetylamino)-2-Deoxy-Beta-D-Gulopyranose, NGZ=2-(Acetylamino)-2-Deoxy-Alpha-L-Glucopyranose, GL0=Beta-D-Gulopyranose, GLC=Alpha-D-Glucose, GXL=Alpha-L-Galactopyranose.   1
BGC-LXZ-NGA-GL0-
BGC-GLC-GLC
  BGC=Beta-D-Glucose, LXZ=2-(Acetylamino)-2-Deoxy-Alpha-D-Idopyranose, NGA=N-Acetyl-D-Galactosamine, GL0=Beta-D-Gulopyranose, GLC=Alpha-D-Glucose.   1
BGC-NOY   BGC=Beta-D-Glucose, NOY=(2r,3s,4r,5r)-5-(Hydroxymethyl)piperidine-2,3,4-Triol.   1
BGC-OXZ   BGC=Beta-D-Glucose, OXZ=Tetrahydrooxazine.   1
BGC-RAM   BGC=Beta-D-Glucose, RAM=Alpha-L-Rhamnose.   4
BGC-RAM-BGC-GAD   BGC=Beta-D-Glucose, RAM=Alpha-L-Rhamnose, GAD=2,6-Anhydro-3-Deoxy-D-Erythro-Hex-2-Enonic acid.   1
BGC-RAM-MAN-BXY   BGC=Beta-D-Glucose, RAM=Alpha-L-Rhamnose, MAN=Alpha-D-Mannose, BXY=Alpha-D-Arabinofuranose.   1
BGC-RER   BGC=Beta-D-Glucose, RER=(1r,3s,4s,5s)-3-Amino-2,3,6-Trideoxy-3-Methyl-Alpha-L-Arabino-Hexopyranose.   9
BGC-SGC-BGC-SGC-
BGC-SGC-BGC-SGC
  BGC=Beta-D-Glucose, SGC=4-Deoxy-4-Thio-Beta-D-Glucopyranose.   1
BGC-SGC-BGC-SGC-
BGC-SGC-BGC-SGC-
SGC
  BGC=Beta-D-Glucose, SGC=4-Deoxy-4-Thio-Beta-D-Glucopyranose.   1
BGC-SGC-SGC   BGC=Beta-D-Glucose, SGC=4-Deoxy-4-Thio-Beta-D-Glucopyranose.   1
BGC-SGC-SGC-SGC-
MA3
  BGC=Beta-D-Glucose, SGC=4-Deoxy-4-Thio-Beta-D-Glucopyranose, MA3=O1-Methyl-4-Deoxy-4-Thio-Alpha-D-Glucose.   1
BGC-SSG-SSG-SGC-
MA3
  BGC=Beta-D-Glucose, SSG=1,4-Deoxy-1,4-Dithio-Beta-D-Glucopyranose, SGC=4-Deoxy-4-Thio-Beta-D-Glucopyranose, MA3=O1-Methyl-4-Deoxy-4-Thio-Alpha-D-Glucose.   1
BGC-XYS-BGC-XYS-
BGC-XYS-BGC
  BGC=Beta-D-Glucose, XYS=Xylopyranose.   1
BGD   N-Benzoyl-L-Glutamyl-[4-Phosphono(difluoromethyl)]-L-Phenylalanine-[4-Phosphono(difluoro-Methyl)]-L-
Phenylalanineamide
  1
BGF   2,5-Bis(4-Guanylphenyl)furan   1
BGL   B-2-Octylglucoside   12
BGN   N-Butanoyl-2-Amino-2-Deoxy-Glucopyranoside   2
BGO   3'-O-(N-Methylanthraniloyl)guanosine-5'-Diphosphate   1
BGP   Beta-Galactose-6-Phosphate   1
BGS   Beta-D-Glucopyranosylsulfonylethane   1
BGT   Tert-Butyl d-Alpha-Glutaminate   1
BGU   2,6-Diamino-1,7-Dihydro-8h-Imidazo[4,5-G]quinazolin-8-One   1
BGV   (3ar,4s,4ar,7ar,8r,9as)-4a,8-Dimethyl-3-Methylidene-2,5-Dioxo-2,3,3a,4,4a,5,7a,8,9,9a-
Decahydroazuleno[6,5-B]furan-4-Yl acetate
  1
BGX   4-Methyl-Pyrroline-5-Carboxylic acid   1

Above is a listing of ligands in PDB beginning with the letter B and part-code BG. The column on the right shows the number of PDB entries containing the given ligand. Other part-codes for this letter are listed in the index on the left.

You can use the index at the top to get to ligands starting with different letters. A drop-down menu gives you access to any given part-code. Alternatively use the search box at top right to search for codes or names.

Note that leading spaces in ligand names (or in names of Het Groups within ligands) are replaced by an underscore, "_". The page labelled "_" on the far right of the index at the top includes all the metal ligands.

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