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List of PDB entries containing Het Group LYS

Het Group: LYS   PDB code: Use mouse to move/zoom 3D Viewers:	Links  Ligands NIST KEGG DrugPort DrugBank PDBeChem HIC-Up Ligand Expo
Name: Lysine
Formula: C6H15N2O2
Compound type: L-Peptide linking
CAS Registry Number: 56-87-1

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PDB id		Count		Name		Method		Date
1a1o		×0		Mhc class i molecule b 5301 Complexed with peptide ls6 (kpivqydnf) from the malaria parasite p. Falciparum		X-ray(2.3Å)		08-Apr-98
1abt		×0		Nmr solution structure of an alpha-bungarotoxin(slash)nicotinic receptor peptide complex		NMR(4 models)		31-Jan-94
1agb		×0		Antagonist HIV-1 gag peptides induce structural changes in hla b8-HIV- 1 gag peptide (ggrkkykl-3r mutation)		X-ray(2.2Å)		16-Jun-97
1agc		×0		Antagonist HIV-1 gag peptides induce structural changes in hla b8-HIV- 1 gag peptide (ggkkkyql-7q mutation)		X-ray(2.1Å)		16-Jun-97
1agd		×0		Antagonist HIV-1 gag peptides induce structural changes in hla b8-HIV- 1 gag peptide (ggkkkykl-index peptide)		X-ray(2.05Å)		16-Jun-97
1age		×0		Antagonist HIV-1 gag peptides induce structural changes in hla b8-HIV- 1 gag peptide (ggkkkyrl-7r mutation)		X-ray(2.3Å)		16-Jun-97
1agf		×0		Antagonist HIV-1 gag peptides induce structural changes in hla b8-HIV- 1 gag peptide (ggkkrykl-5r mutation)		X-ray(2.2Å)		16-Jun-97
1akj		×0		Complex of the human mhc class i glycoprotein hla-a2 and the t cell coreceptor cd8		X-ray(2.65Å)		17-Sep-97
1aqc		×1		X11 ptb domain-10mer peptide complex		X-ray(2.3Å)		24-Dec-97
1b05		×0		Structure of oligo-peptide binding protein complexed with lys-cys-lys		X-ray(2Å)		25-Nov-98
1b0h		×0		Oligo-peptide binding protein complexed with lysyl-napthylalanyl- lysine		X-ray(1.9Å)		11-Nov-98
1b1h		×0		Oligo-peptide binding protein/tripeptide (lys hpe lys) complex		X-ray(1.8Å)		18-Nov-98
1b2h		×0		Oligo-peptide binding protein complexed with lysyl-ornithyl-lysine		X-ray(1.9Å)		16-Nov-98
1b32		×0		Oligo-peptide binding protein (oppa) complexed with kmk		X-ray(1.75Å)		23-Dec-98
1b3f		×0		Oligo-peptide binding protein (oppa) complexed with khk		X-ray(1.8Å)		16-Dec-98
1b3g		×0		Oligo-peptide binding protein (oppa) complexed with kik		X-ray(2Å)		16-Dec-98
1b3h		×0		Oligo-peptide binding protein complexed with lysyl-cyclohexylalanyl- lysine		X-ray(2Å)		18-Nov-98
1b3l		×2		Oligo-peptide binding protein (oppa) complexed with kgk		X-ray(2Å)		16-Dec-98
1b40		×0		Oligo-peptide binding protein (oppa) complexed with kfk		X-ray(2.2Å)		13-Jan-99
1b46		×0		Oligo-peptide binding protein (oppa) complexed with kpk		X-ray(1.8Å)		13-Jan-99
1b4h		×0		Oligo-peptide binding protein complexed with lysyl-diaminobutyric acid-lysine		X-ray(1.9Å)		18-Nov-98
1b4z		×0		Oligo-peptide binding protein (oppa) complexed with kdk		X-ray(1.75Å)		13-Jan-99
1b51		×0		Oligo-peptide binding protein (oppa) complexed with ksk		X-ray(1.8Å)		20-Jan-99
1b52		×0		Oligo-peptide binding protein (oppa) complexed with ktk		X-ray(2.3Å)		20-Jan-99
1b58		×0		Oligo-peptide binding protein (oppa) complexed with kyk		X-ray(1.8Å)		20-Jan-99
1b5h		×0		Oligo-peptide binding protein complexed with lysyl-diaminopropanoic acid-lysine		X-ray(1.9Å)		18-Nov-98
1b5i		×0		Oligo-peptide binding protein (oppa) complexed with knk		X-ray(1.9Å)		13-Jan-99
1b5j		×0		Oligo-peptide binding protein (oppa) complexed with kqk		X-ray(1.8Å)		13-Jan-99
1b6h		×0		Oligo-peptide binding protein complexed with lysyl-norvalyl-lysine		X-ray(1.8Å)		18-Nov-98
1b7h		×0		Oligo-peptide binding protein complexed with lysyl-norleucyl-lysine		X-ray(2Å)		25-Nov-98
1b8q		×0		Solution structure of the extended neuronal nitric oxide synthase pdz domain complexed with an associated peptide		NMR(15 models)		29-Apr-99
1b9j		×0		Oligo-peptide binding protein (oppa) complexed with klk		X-ray(1.8Å)		22-Feb-99
1bbu		×0		Lysyl-tRNA synthetase (lyss) complexed with lysine		X-ray(2.7Å)		10-Nov-00
1be9		×0		The third pdz domain from the synaptic protein psd-95 in complex with a c-terminal peptide derived from cript.		X-ray(1.82Å)		21-Oct-98
1bfz		×0		Bound conformation of n-terminal cleavage product peptide mimic (p1-p9 of release site) while bound to hcmv protease as determined by transferred noesy experiments (p1-p5 shown only), nmr, 32 structures		NMR(32 models)		25-May-99
1bk6		×8		Karyopherin alpha (yeast) + sv40 t antigen nls		X-ray(2.8Å)		13-Jan-99
1bmb		×0		Grb2-sh2 domain in complex with kpfy Vnvef (pkf270-974)		X-ray(1.8Å)		29-Jul-98
1br7		×0		E2-c, an ubiquitin conjugating enzyme required for the destruction of mitotic cyclins		X-ray(2Å)		02-Sep-98
1c5w		×0		Structural basis for selectivity of a small molecule, s1-binding, sub- micromolar inhibitor of urokinase type plasminogen activator		X-ray(1.94Å)		22-Dec-00
1c5x		×0		Structural basis for selectivity of a small molecule, s1-binding, sub- micromolar inhibitor of urokinase type plasminogen activator		X-ray(1.75Å)		22-Dec-00
1c5y		×0		Structural basis for selectivity of a small molecule, s1-binding, sub- micromolar inhibitor of urokinase type plasminogen activator		X-ray(1.65Å)		22-Dec-00
1c5z		×0		Structural basis for selectivity of a small molecule, s1-binding, sub- micromolar inhibitor of urokinase type plasminogen activator		X-ray(1.85Å)		22-Dec-00
1ca9		×1		Structure of tnf receptor associated factor 2 in complex with a peptide from tnf-r2		X-ray(2.3Å)		12-Apr-99
1cft		×0		Anti-p24 (HIV-1) fab fragment cb41 complexed with an epitope-unrelated d-peptide		X-ray(2.8Å)		31-Mar-99
1cka		×0		Structural basis for the specific interaction of lysine-containing proline-rich peptides with the n-terminal sh3 domain of c-crk		X-ray(1.5Å)		08-May-95
1cu4		×0		Crystal structure of the anti-prion fab 3f4 in complex with its peptide epitope		X-ray(2.9Å)		17-Apr-00
1cvu		×0		Crystal structure of arachidonic acid bound to the cyclooxygenase active site of cox-2		X-ray(2.4Å)		16-May-00
1d4w		×1		Crystal structure of the xlp protein sap in complex with slam phosphopeptide		X-ray(1.8Å)		14-Oct-99
1d7t		×0		Nmr structure of an engineered contryphan cyclic peptide (motif cpxxpxc)		NMR(20 models)		13-Sep-00
1d8e		×0		Zinc-depleted ftase complexed with k-ras4b peptide substrate and fpp analog.		X-ray(3Å)		20-Mar-00
1e1o		×0		Lysyl-tRNA synthetase (lysu) hexagonal form, complexed with lysine		X-ray(2.12Å)		28-Jul-00
1e22		×0		Lysyl-tRNA synthetase (lysu) hexagonal form complexed with lysine and the non-hydrolysable atp analogue amp-pcp		X-ray(2.43Å)		28-Jul-00
1e24		×0		Lysyl-tRNA synthetase (lysu) hexagonal form complexed with lysine and atp and mn2+		X-ray(2.35Å)		28-Jul-00
1e27		×0		Nonstandard peptide binding of hla-b 5101 Complexed with HIV immunodominant epitope km1(lppvvakei)		X-ray(2.2Å)		12-Sep-00
1e6i		×0		Bromodomain from gcn5 complexed with acetylated h4 peptide		X-ray(1.87Å)		24-Nov-00
1ee4		×6		Crystal structure of yeast karyopherin (importin) alpha in a complex with a c-myc nls peptide		X-ray(2.1Å)		29-Mar-00
1ejl		×4		Mouse importin alpha-sv40 large t antigen nls peptide complex		X-ray(2.8Å)		24-Apr-00
1ekb		×0		The serine protease domain of enteropeptidase bound to inhibitor val- asp-asp-asp-asp-lys-chloromethane		X-ray(2.3Å)		14-Oct-99
1f7a		×0		How does a symmetric dimer recognize an asymmetric substrate? a substrate complex of HIV-1 protease.		X-ray(2Å)		27-Jun-01
1f90		×0		Fab fragment of monoclonal antibody (lnkb-2) against human interleukin-2 in complex with antigenic peptide		X-ray(2.6Å)		11-Jul-01
1f95		×1		Solution structure of dynein light chain 8 (dlc8) and bim peptide complex		NMR(1 model)		28-Feb-01
1fch		×1		Crystal structure of the pts1 complexed to the tpr region of human pex5		X-ray(2.2Å)		06-Dec-00
1ffn		×1		Crystal structure of murine class i h-2db complexed with peptide gp33(c9m)		X-ray(2.7Å)		11-Dec-02
1fg2		×3		Crystal structure of the lcmv peptidic epitope gp33 in complex with the murine class i mhc molecule h-2db		X-ray(2.75Å)		04-Oct-00
1fjt		×0		Thermolysin (50% acetonitrile soaked crystals)		X-ray(2.2Å)		18-Apr-01
1fm6		×0		The 2.1 angstrom resolution crystal structure of the heterodimer of the human rxralpha and ppargamma ligand binding domains respectively bound with 9-cis retinoic acid and rosiglitazone and co-activator peptides.		X-ray(2.1Å)		16-Feb-01
1fm9		×0		The 2.1 angstrom resolution crystal structure of the heterodimer of the human rxralpha and ppargamma ligand binding domains respectively bound with 9-cis retinoic acid and gi262570 and co-activator peptides.		X-ray(2.1Å)		16-Feb-01
1foz		×0		Structure of cyclic peptide inhibitors of mammalian ribonucleotide reductase		NMR(3 models)		22-Nov-00
1fy5		×0		Fusarium oxysporum trypsin at atomic resolution		X-ray(0.81Å)		07-Feb-01
1g1h		×0		Crystal structure of protein tyrosine phosphatase 1b complexed with a bis-phosphorylated peptide (etd(ptr)(ptr)rkggkgll) from the insulin receptor kinase		X-ray(2.4Å)		17-Jan-01
1g3f		×0		Nmr structure of a 9 residue peptide from smac/diablo complexed to the bir3 domain of xiap		NMR(1 model)		10-Jan-01
1gac		×1		Nmr structure of asymmetric homodimer of a82846b, a glycopeptide antibiotic, complexed with its cell wall pentapeptide fragment		NMR(80 models)		17-Aug-96
1gch		×0		The stereochemistry of substrate binding to chymotrypsin a=gamma=		X-ray(1.9Å)
1gdn		×0		Fusarium oxysporum trypsin at atomic resolution		X-ray(0.81Å)		07-Feb-01
1ggi		×1		Crystal structure of an HIV-1 neutralizing antibody 50.1 in complex with its v3 loop peptide antigen		X-ray(2.8Å)		31-Oct-93
1gi7		×0		A novel serine protease inhibition motif involving a multi-centered short hydrogen bonding network at the active site		X-ray(1.79Å)		22-Jan-02
1gi8		×0		A novel serine protease inhibition motif involving a multi-centered short hydrogen bonding network at the active site		X-ray(1.75Å)		22-Jan-02
1gi9		×0		A novel serine protease inhibition motif involving a multi-centered short hydrogen bonding network at the active site		X-ray(1.8Å)		22-Jan-02
1gj7		×0		Engineering inhibitors highly selective for the s1 sites of ser190 trypsin-like serine protease drug targets		X-ray(1.5Å)		27-Apr-02
1gj9		×0		Engineering inhibitors highly selective for the s1 sites of ser190 trypsin-like serine protease drug targets		X-ray(1.8Å)		27-Apr-02
1gjb		×0		Engineering inhibitors highly selective for the s1 sites of ser190 trypsin-like serine protease drug targets		X-ray(1.9Å)		27-Apr-02
1gjc		×0		Engineering inhibitors highly selective for the s1 sites of ser190 trypsin-like serine protease drug targets		X-ray(1.73Å)		27-Apr-02
1go6		×3		Balhimycin in complex with lys-d-ala-d-ala		X-ray(0.98Å)		13-Jun-02
1gwq		×1		Human oestrogen receptor alpha ligand-binding domain in complex with raloxifene core and tif2 nrbox2 peptide		X-ray(2.45Å)		29-Aug-02
1gxw		×0		The 2.2 a resolution structure of thermolysin crystallized in presence of potassium thiocyanate		X-ray(2.18Å)		05-Dec-02
1gy3		×1		Pcdk2/cyclin a in complex with mgadp, nitrate and peptide substrate		X-ray(2.7Å)		29-Apr-02
1h24		×0		Cdk2/cyclina in complex with a 9 residue recruitment peptide from e2f		X-ray(2.5Å)		01-Feb-03
1h25		×0		Cdk2/cyclin a in complex with an 11-residue recruitment peptide from retinoblastoma-associated protein		X-ray(2.5Å)		01-Feb-03
1h26		×0		Cdk2/cyclina in complex with an 11-residue recruitment peptide from p53		X-ray(2.24Å)		01-Feb-03
1h28		×1		Cdk2/cyclina in complex with an 11-residue recruitment peptide from p107		X-ray(2.8Å)		01-Feb-03
1h6e		×0		Mu2 adaptin subunit (ap50) of ap2 adaptor (second domain), complexed with ctla-4 internalization peptide ttgvyvkmppt		X-ray(3.6Å)		28-Nov-01
1h6w		×0		Crystal structure of a heat- and protease-stable fragment of the bacteriophage t4 short fibre		X-ray(1.9Å)		13-Dec-01
1hff		×0		Nmr solution structures of the vmip-ii 1-10 peptide from kaposi's sarcoma-associated herpesvirus.		NMR(55 models)		07-Dec-00
1hhj		×1		The antigenic identity of peptide(slash)mhc complexes: a comparison of the conformation of five peptides presented by hla-a2		X-ray(2.5Å)		31-Oct-93
1hhz		×2		Deglucobalhimycin in complex with cell wall pentapeptide		X-ray(0.99Å)		05-Sep-03
1hkv		×1		Mycobacterium diaminopimelate dicarboxylase (lysa)		X-ray(2.6Å)		20-Mar-03
1hl3		×0		Ctbp/bars in ternary complex with NAD(h) and pidlskk peptide		X-ray(3.1Å)		19-Jun-03
1hqr		×0		Crystal structure of a superantigen bound to the high-affinity, zinc- dependent site on mhc class ii		X-ray(3.2Å)		03-Jan-01
1hr8		×2		Yeast mitochondrial processing peptidase beta-e73q mutant complexed with cytochromE C oxidase iv signal peptide		X-ray(2.7Å)		11-Jul-01
1hr9		×3		Yeast mitochondrial processing peptidase beta-e73q mutant complexed with malate dehydrogenase signal peptide		X-ray(3.01Å)		11-Jul-01