|
|
 |
|
| PDB id |
|
Count |
|
Name |
|
Method |
|
Date |
|
|
|
|
×0
|
|
Mhc class i molecule b 5301 Complexed with peptide tpydinqml from gag protein of hiv2
|
|
X-ray(2.3Å)
|
|
08-Apr-98
|
|
|
|
×0
|
|
Mhc class i molecule b 5301 Complexed with peptide ls6 (kpivqydnf) from the malaria parasite p. Falciparum
|
|
X-ray(2.3Å)
|
|
08-Apr-98
|
|
|
|
×0
|
|
Structure of thrombin inhibited by aeruginosin298-a from a blue-green alga
|
|
X-ray(2.1Å)
|
|
01-Jul-98
|
|
|
|
×0
|
|
HIV-1 protease complexed with a tripeptide inhibitor
|
|
X-ray(2Å)
|
|
29-Apr-98
|
|
|
|
×1
|
|
14-3-3 protein zeta bound to r18 peptide
|
|
X-ray(3.35Å)
|
|
02-Mar-99
|
|
|
|
×0
|
|
Thrombin complexed with hirugen and a beta-strand mimetic inhibitor
|
|
X-ray(2.12Å)
|
|
27-May-98
|
|
|
|
×0
|
|
Crystal structures of thrombin with thiazole-containing inhibitors: probes of the s1' binding site
|
|
X-ray(1.8Å)
|
|
29-Apr-98
|
|
|
|
×0
|
|
Human thrombin complexed with novel synthetic peptide mimetic inhibitor and hirugen
|
|
X-ray(2.06Å)
|
|
27-May-98
|
|
|
|
×0
|
|
Thrombin complexed with a beta-mimetic thiazole-containing inhibitor
|
|
X-ray(2.2Å)
|
|
17-Jun-98
|
|
|
|
×1
|
|
Decamer-like conformation of a nano-peptide bound to hla-b3501 due to nonstandard positioning of thE C-terminus
|
|
X-ray(3.2Å)
|
|
21-Oct-98
|
|
|
|
×0
|
|
Decamer-like conformation of a nano-peptide bound to hla-b3501 due to nonstandard positioning of thE C-terminus
|
|
X-ray(2.5Å)
|
|
21-Oct-98
|
|
|
|
×0
|
|
Complex of thrombin with and inhibitor containing a novel p1 moiety
|
|
X-ray(2Å)
|
|
12-Nov-97
|
|
|
|
×0
|
|
Human alpha-thrombin inhibition by eoc-d-phe-pro-azalys-onp
|
|
X-ray(2Å)
|
|
03-Dec-97
|
|
|
|
×0
|
|
Human alpha-thrombin inhibition by cbz-pro-azalys-onp
|
|
X-ray(2Å)
|
|
03-Dec-97
|
|
|
|
×0
|
|
Small subunit c-terminal inhibitory peptide of mouse ribonucleotide reductase as bound to the large subunit, nmr, 26 structures
|
|
NMR(26 models)
|
|
15-May-97
|
|
|
|
×0
|
|
Crystal structure of human alpha-thrombin complexed with hirugen and p-amidinophenylpyruvate at 1.6 angstroms resolution
|
|
X-ray(1.6Å)
|
|
17-Mar-96
|
|
|
|
×0
|
|
Human alpha-thrombin ternary complex with the exosite inhibitor hirugen and active site inhibitor phch2oco-d-dpa-pro-borompg
|
|
X-ray(1.85Å)
|
|
15-Oct-97
|
|
|
|
×0
|
|
Human alpha-thrombin ternary complex with exosite inhibitor hirugen and active site inhibitor phch2oco-d-dpa-pro-boroval
|
|
X-ray(2.1Å)
|
|
15-Oct-97
|
|
|
|
×1
|
|
Human aspartylglucosaminidase complex with reaction product
|
|
X-ray(2.3Å)
|
|
23-Dec-96
|
|
|
|
×0
|
|
Novel covalent thrombin inhibitor from plant extract
|
|
X-ray(2.2Å)
|
|
28-Oct-98
|
|
|
|
×0
|
|
Thrombin inhibitor from theonalla, cyclotheanamide-based macrocyclic tripeptide motif
|
|
X-ray(1.8Å)
|
|
18-Mar-98
|
|
|
|
×0
|
|
Crystal structures of peptide complexes of the amino-terminal sh2 domain of the syp tyrosine phosphatase
|
|
X-ray(2.3Å)
|
|
31-Aug-94
|
|
|
|
×0
|
|
Oligo-peptide binding protein (oppa) complexed with kdk
|
|
X-ray(1.75Å)
|
|
13-Jan-99
|
|
|
|
×0
|
|
Human thrombin complexed with novel synthetic peptide mimetic inhibitor and hirugen
|
|
X-ray(2.07Å)
|
|
27-May-98
|
|
|
|
×0
|
|
Solution structure of the extended neuronal nitric oxide synthase pdz domain complexed with an associated peptide
|
|
NMR(15 models)
|
|
29-Apr-99
|
|
|
|
×0
|
|
Alpha-thrombin complexed with hirugen and proflavin
|
|
X-ray(2Å)
|
|
14-Oct-98
|
|
|
|
×0
|
|
X-ray structure of the complex of human alpha thrombin with the inhibitor sdz 229-357
|
|
X-ray(2.3Å)
|
|
04-Nov-98
|
|
|
|
×0
|
|
X-ray crystallographic determination of the structure of bovine lens leucine aminopeptidase complexed with amastatin: formulation of a catalytic mechanism featuring a gem-diolate transition state
|
|
X-ray(2.4Å)
|
|
31-Jan-94
|
|
|
|
×0
|
|
Human alpha-thrombin complexed with [s-(r ,R )]-4-[(Aminoiminomethyl) amino]-n-[[1-[3-hydroxy-2-[(2-naphthalenylsulfonyl)amino]-1- oxopropyl]-2-pyrrolidinyl] methyl]butanamide (bms-186282)
|
|
X-ray(2.6Å)
|
|
07-Dec-96
|
|
|
|
×0
|
|
Human alpha-thrombin complexed with [s-(r ,R )]-1-(Aminoiminomethyl)- n-[[1-[n-[(2-naphthalenylsulfonyl)-l-seryl]-pyrrolidinyl]methyl]-3- piperidenecarboxamide (bms-189090)
|
|
X-ray(2.8Å)
|
|
07-Dec-96
|
|
|
|
×0
|
|
E2-c, an ubiquitin conjugating enzyme required for the destruction of mitotic cyclins
|
|
X-ray(2Å)
|
|
02-Sep-98
|
|
|
|
×0
|
|
Mu2 adaptin subunit (ap50) of ap2 adaptor (second domain), complexed with tgn38 internalization peptide dyqrln
|
|
X-ray(2.7Å)
|
|
25-Nov-98
|
|
|
|
×0
|
|
Cyclic peptide inhibitor of human ptp1b
|
|
X-ray(2.1Å)
|
|
16-Feb-99
|
|
|
|
×0
|
|
Selective non electrophilic thrombin inhibitors with cyclohexyl moieties.
|
|
X-ray(2.1Å)
|
|
27-Sep-00
|
|
|
|
×0
|
|
Selective non-electrophilic thrombin inhibitors
|
|
X-ray(2.7Å)
|
|
09-Oct-00
|
|
|
|
×0
|
|
Structural basis for selectivity of a small molecule, s1-binding, sub- micromolar inhibitor of urokinase type plasminogen activator
|
|
X-ray(1.47Å)
|
|
22-Dec-00
|
|
|
|
×0
|
|
Structural basis for selectivity of a small molecule, s1-binding, sub- micromolar inhibitor of urokinase type plasminogen activator
|
|
X-ray(1.5Å)
|
|
22-Dec-00
|
|
|
|
×2
|
|
Peptide-in-groove interactions link target proteins to the b-propeller of clathrin
|
|
X-ray(2.9Å)
|
|
07-Feb-00
|
|
|
|
×1
|
|
Peptide-in-groove interactions link target proteins to the b-propeller of clathrin
|
|
X-ray(2.9Å)
|
|
07-Feb-00
|
|
|
|
×0
|
|
1.9a structure of the therapeutic antibody campath-1h fab in complex with a synthetic peptide antigen
|
|
X-ray(1.9Å)
|
|
25-Jun-99
|
|
|
|
×0
|
|
Anti-p24 (HIV-1) fab fragment cb41 complexed with an epitope-related peptide
|
|
X-ray(2.65Å)
|
|
30-Mar-99
|
|
|
|
×0
|
|
Complex recognition of the supertypic bw6-determinant on hla-b and-c molecules by the monoclonal antibody sfr8-b6
|
|
X-ray(2.7Å)
|
|
18-Nov-03
|
|
|
|
×2
|
|
Crystal structure of the complex of apopain with the tetrapeptide inhibitor ace-dvad-fmc
|
|
X-ray(2.3Å)
|
|
24-Dec-97
|
|
|
|
×0
|
|
Human p56lck tyrosine kinase complexed with phosphopeptide
|
|
X-ray(2.25Å)
|
|
07-Dec-96
|
|
|
|
×2
|
|
Crystal structure of the complex between the traf domain of human traf2 and an lmp1 binding peptide
|
|
X-ray(2Å)
|
|
08-Mar-00
|
|
|
|
×0
|
|
Molecular complex of cholecystokinin-8 and n-terminus of the cholecystokinin a receptor by nmr spectroscopy
|
|
NMR(1 model)
|
|
17-Nov-99
|
|
|
|
×0
|
|
Structure of thrombin complexed with selective non-electrophilic inhibitors having cyclohexyl moieties at p1
|
|
X-ray(2Å)
|
|
25-Oct-00
|
|
|
|
×0
|
|
Structure of thrombin complexed with selective non-electophilic inhibitors having cyclohexyl moieties at p1
|
|
X-ray(2.3Å)
|
|
30-Oct-00
|
|
|
|
×0
|
|
Peptide deformylase:thiorphan docking model 1
|
|
Theor. model
|
|
24-Apr-00
|
|
|
|
×1
|
|
Crossreactive binding of a circularized peptide to an anti-tgfalpha antibody fab-fragment
|
|
X-ray(1.9Å)
|
|
12-Jul-01
|
|
|
|
×0
|
|
Anion-selective porin from comamonas acidovorans
|
|
X-ray(2.1Å)
|
|
12-Jul-01
|
|
|
|
×0
|
|
Complex structure of human thrombin with n-methyl-arginine inhibitor
|
|
X-ray(1.8Å)
|
|
28-Jan-02
|
|
|
|
×1
|
|
Crystal structure of yeast karyopherin (importin) alpha in a complex with a c-myc nls peptide
|
|
X-ray(2.1Å)
|
|
29-Mar-00
|
|
|
|
×0
|
|
Crystal structure of protein tyrosine phosphatase 1b complexed with acetyl-d-a-d-bpa-ptyr-l-i-p-q-q-g
|
|
X-ray(1.9Å)
|
|
01-Feb-01
|
|
|
|
×0
|
|
Crystal structure of protein tyrosine phosphatase 1b complexed with acetyl-e-l-e-f-ptyr-m-d-y-e-nh2
|
|
X-ray(1.8Å)
|
|
01-Feb-01
|
|
|
|
×0
|
|
Structure of a complex between the human natural killer cell receptor kir2dl2 and a class i mhc ligand hla-cw3
|
|
X-ray(3Å)
|
|
14-Jun-00
|
|
|
|
×0
|
|
The serine protease domain of enteropeptidase bound to inhibitor val- asp-asp-asp-asp-lys-chloromethane
|
|
X-ray(2.3Å)
|
|
14-Oct-99
|
|
|
|
×0
|
|
Crystal structure of the tpr2a domain of hop in complex with the hsp90 peptide meevd
|
|
X-ray(1.9Å)
|
|
26-Apr-00
|
|
|
|
×1
|
|
Crystal structure of the tpr1 domain of hop in complex with a hsc70 peptide
|
|
X-ray(1.6Å)
|
|
26-Apr-00
|
|
|
|
×1
|
|
Crystal structure of caspase-7 in complex with acetyl-asp-glu-val-asp- cho
|
|
X-ray(2.35Å)
|
|
23-May-01
|
|
|
|
×0
|
|
Complex between fv antibody fragment and an analogue of the main immunogenic region of the acetylcholine receptor
|
|
NMR(1 model)
|
|
15-Jun-00
|
|
|
|
×1
|
|
Solution structure of dynein light chain 8 (dlc8) and bim peptide complex
|
|
NMR(1 model)
|
|
28-Feb-01
|
|
|
|
×5
|
|
Caspase-8 specificity probed at subsite s4: crystal structure of the caspase-8-z-devd-cho
|
|
X-ray(2.9Å)
|
|
10-Jul-01
|
|
|
|
×0
|
|
Structure of a cbl-ubch7 complex: ring domain function in ubiquitin- protein ligases
|
|
X-ray(2.9Å)
|
|
30-Aug-00
|
|
|
|
×0
|
|
Solution structure of the fha2 domain of rad53 complexed with a phosphotyrosyl peptide
|
|
NMR(20 models)
|
|
18-Oct-00
|
|
|
|
×0
|
|
Three-dimensional structure of phosphoenolpyruvate carboxylase from escherichia coli at 2.8 a resolution
|
|
X-ray(2.8Å)
|
|
09-Feb-99
|
|
|
|
×0
|
|
Murine alloreactive scfv tcr-peptide-mhc class i molecule complex
|
|
X-ray(2.5Å)
|
|
02-Oct-00
|
|
|
|
×0
|
|
Structure of cyclic peptide inhibitors of mammalian ribonucleotide reductase
|
|
NMR(3 models)
|
|
22-Nov-00
|
|
|
|
×0
|
|
Active site mimetic inhibition of thrombin
|
|
X-ray(2.3Å)
|
|
27-Feb-95
|
|
|
|
×0
|
|
Crystal structure of the complex formed between the catalytic domain of shp-1 and an in vitro peptide substrate py469 derived from shps-1.
|
|
X-ray(2.5Å)
|
|
07-Mar-01
|
|
|
|
×0
|
|
Crystal structure, sequence, and epitope mapping of a peptide complex of an anti-influenza ha peptide antibody fab 26(slash)9: fine-tuning antibody specificity
|
|
X-ray(2.8Å)
|
|
31-May-94
|
|
|
|
×0
|
|
Crystal structure of protein tyrosine phosphatase 1b complexed with a tri-phosphorylated peptide (rdi(ptr)etd(ptr)(ptr)rk) from the insulin receptor kinase
|
|
X-ray(2Å)
|
|
17-Jan-01
|
|
|
|
×0
|
|
Crystal structure of protein tyrosine phosphatase 1b complexed with a mono-phosphorylated peptide (etdy(ptr)rkggkgll) from the insulin receptor kinase
|
|
X-ray(2.2Å)
|
|
17-Jan-01
|
|
|
|
×0
|
|
Crystal structure of protein tyrosine phosphatase 1b complexed with a bis-phosphorylated peptide (etd(ptr)(ptr)rkggkgll) from the insulin receptor kinase
|
|
X-ray(2.4Å)
|
|
17-Jan-01
|
|
|
|
×0
|
|
Thrombin inhibitor complex
|
|
X-ray(2Å)
|
|
23-Oct-01
|
|
|
|
×0
|
|
Thrombin inhibitor complex
|
|
X-ray(1.9Å)
|
|
23-Oct-01
|
|
|
|
×3
|
|
Epid h67n complexed with substrate peptide dsytc
|
|
X-ray(2.57Å)
|
|
02-May-01
|
|
|
|
×0
|
|
X-ray structure of the n-terminal fha domain from s. Cerevisiae rad53p in complex with a phosphothreonine peptide at 1.6 a resolution
|
|
X-ray(1.6Å)
|
|
13-Dec-00
|
|
|
|
×0
|
|
Crystal structure of mhc class i h-2kb heavy chain complexed with beta-2 microglobulin and yeast alpha-glucosidase
|
|
X-ray(1.5Å)
|
|
17-Jul-02
|
|
|
|
×0
|
|
Crystal structure of mhc class i h-2kb heavy chain complexed with beta-2 microglobulin and muc1 vntr peptide sapdtrpa
|
|
X-ray(1.6Å)
|
|
17-Jul-02
|
|
|
|
×3
|
|
Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with aspartate
|
|
X-ray(3.3Å)
|
|
05-Sep-01
|
|
|
|
×0
|
|
The stereochemistry of substrate binding to chymotrypsin a=gamma=
|
|
X-ray(1.9Å)
|
|
|
|
|
|
×1
|
|
Thermus thermophilus aspartate aminotransferase double mutant 1 complexed with aspartate
|
|
X-ray(2.5Å)
|
|
14-Nov-01
|
|
|
|
×0
|
|
X-ray crystal structure of gamma-chymotrypsin in hexane
|
|
X-ray(2.2Å)
|
|
31-Oct-93
|
|
|
|
×0
|
|
Rb pocket bound to e7 lxcxe motif
|
|
X-ray(1.85Å)
|
|
02-Dec-98
|
|
|
|
×1
|
|
Human oestrogen receptor alpha ligand-binding domain in complex with raloxifene core and tif2 nrbox2 peptide
|
|
X-ray(2.45Å)
|
|
29-Aug-02
|
|
|
|
×1
|
|
Human oestrogen receptor alpha ligand-binding domain in complex with 17beta-oestradiol and tif2 nrbox3 peptide
|
|
X-ray(2.4Å)
|
|
29-Aug-02
|
|
|
|
×3
|
|
Fha domain from human chk2 kinase in complex with a synthetic phosphopeptide
|
|
X-ray(2.7Å)
|
|
13-Jun-02
|
|
|
|
×0
|
|
Cdk2/cyclina in complex with a 9 residue recruitment peptide from e2f
|
|
X-ray(2.5Å)
|
|
01-Feb-03
|
|
|
|
×0
|
|
Cdk2/cyclin a in complex with an 11-residue recruitment peptide from retinoblastoma-associated protein
|
|
X-ray(2.5Å)
|
|
01-Feb-03
|
|
|
|
×0
|
|
X-ray structure of the human alpha-thrombin complex with a tripeptide phosphonate inhibitor.
|
|
X-ray(1.4Å)
|
|
26-Feb-01
|
|
|
|
×0
|
|
X-ray crystal structure of human alpha-thrombin with a tripeptide phosphonate inhibitor.
|
|
X-ray(1.75Å)
|
|
02-Mar-01
|
|
|
|
×0
|
|
The isomorphous structures of prethrombin2, hirugen-and ppack- thrombin: changes accompanying activation and exosite binding to thrombin
|
|
X-ray(2Å)
|
|
20-Dec-94
|
|
|
|
×0
|
|
The isomorphous structures of prethrombin2, hirugen-and ppack- thrombin: changes accompanying activation and exosite binding to thrombin
|
|
X-ray(2.3Å)
|
|
20-Dec-94
|
|
|
|
×0
|
|
Nmr solution structures of the vmip-ii 1-10 peptide from kaposi's sarcoma-associated herpesvirus.
|
|
NMR(55 models)
|
|
07-Dec-00
|
|
|
|
×0
|
|
Structure of the hirugen and hirulog 1 complexes of alpha-thrombin
|
|
X-ray(2.2Å)
|
|
31-Jan-94
|
|
|
|
×0
|
|
The antigenic identity of peptide(slash)mhc complexes: a comparison of the conformation of five peptides presented by hla-a2
|
|
X-ray(3Å)
|
|
31-Oct-93
|
|
|
|
×2
|
|
Structural evidence for induced fit as a mechanism for antibody- antigen recognition
|
|
X-ray(2.9Å)
|
|
31-Jan-94
|
|
|
|
×0
|
|
Structural evidence for induced fit as a mechanism for antibody- antigen recognition
|
|
X-ray(3.1Å)
|
|
31-Jan-94
|
|
|
|
×0
|
|
Ctbp/bars in ternary complex with NAD(h) and pidlskk peptide
|
|
X-ray(3.1Å)
|
|
19-Jun-03
|
|
