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PDBsum entry 9ldb

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 9ldb calculated with MOLE 2.0 PDB id
9ldb
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 2.21 94.9 -1.83 -0.35 27.6 79 11 6 1 5 2 2 0  
2 1.18 1.70 103.5 -1.38 -0.29 20.0 82 7 3 3 6 2 1 0  NAD 401 A SO4 402 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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