 |
PDBsum entry 9icu
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 9icu calculated with MOLE 2.0
|
PDB id
|
|
|
|
9icu
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
0 tunnels,
coloured by tunnel radius |
 |
2 tunnels,
coloured by
tunnel radius
|
2 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.37 |
1.37 |
22.0 |
-0.97 |
-0.55 |
12.1 |
94 |
 |
3 |
0 |
2 |
1 |
0 |
0 |
0 |
 |
DT 5 P DA 3 T DT 4 T DC 5 T DT 6 T
|
 |
 |
2 |
 |
1.36 |
1.36 |
27.2 |
-1.29 |
-0.63 |
10.2 |
93 |
3 |
0 |
4 |
1 |
0 |
0 |
0 |
DG 3 P DA 4 P DT 5 P DA 3 T DT 4 T DC 5 T DT 6 T DG 7 T DT 8 T
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |