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PDBsum entry 9icu

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Top Page protein dna_rna ligands metals tunnels links
Tunnel analysis for: 9icu calculated with MOLE 2.0 PDB id
9icu
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 1.37 22.0 -0.97 -0.55 12.1 94 3 0 2 1 0 0 0  DT 5 P DA 3 T DT 4 T DC 5 T DT 6 T
2 1.36 1.36 27.2 -1.29 -0.63 10.2 93 3 0 4 1 0 0 0  DG 3 P DA 4 P DT 5 P DA 3 T DT 4 T DC 5 T DT 6 T
DG 7 T DT 8 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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