PDBsum entry 9icc Go to PDB code:  Tunnel analysis for: 9icc calculated with MOLE 2.0 PDB id 9icc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 1.44 18.5 -1.06 -0.39 15.3 94 3 0 2 1 0 0 0  DT 3 T DT 4 T DA 5 T DG 6 T 2 1.21 1.21 21.7 -1.57 -0.24 17.4 74 3 0 1 1 1 1 0  DA 2 T DT 3 T DT 4 T 3 1.22 1.21 23.5 -2.05 -0.07 21.9 67 4 1 0 0 3 0 0  DG 7 P DC 1 T DA 2 T DT 3 T DT 4 T 4 1.44 1.44 23.7 -1.23 -0.52 11.1 95 3 0 3 2 0 0 0  DT 3 P DA 4 P DA 5 P DT 3 T DT 4 T DA 5 T DG 6 T DA 7 T DA 8 T 5 1.22 1.21 23.7 -1.27 -0.36 17.1 81 3 0 0 1 1 0 0  DA 2 T DT 3 T DT 4 T 6 1.21 2.32 18.1 2.48 0.52 1.1 88 0 0 2 10 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.