PDBsum entry 8ica Go to PDB code:  Tunnel analysis for: 8ica calculated with MOLE 2.0 PDB id 8ica Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.65 1.65 16.7 -0.92 -0.31 13.8 99 2 0 2 1 0 0 0  DA 5 P DT 6 P DG 7 P DT 3 T DT 4 T DA 5 T DG 6 T 2 1.85 1.95 27.2 -1.17 -0.47 13.0 95 2 1 3 1 0 0 0  DA 4 P DA 5 P DT 6 P DG 7 P DT 3 T DT 4 T DA 5 T DG 6 T DA 7 T DA 8 T 3 1.23 1.23 17.0 -0.44 0.38 18.4 81 4 0 0 5 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.