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PDBsum entry 8h8c

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 8h8c calculated with MOLE 2.0 PDB id
8h8c
Pores calculated on whole structure Pores calculated excluding ligands

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16 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 3.40 39.9 1.38 0.39 5.3 75 1 3 2 10 5 3 0  
2 1.24 2.34 55.8 -0.69 -0.03 16.6 70 4 4 4 6 6 3 0  
3 1.28 1.44 55.7 -1.59 -0.44 14.2 80 2 5 6 5 4 1 0  
4 1.78 1.78 57.7 -1.09 -0.49 12.8 76 5 5 3 3 4 0 0  
5 1.19 1.22 61.1 -1.43 -0.34 17.5 83 3 7 5 4 5 0 1  
6 1.60 1.60 67.3 -1.51 -0.33 23.7 78 10 4 3 3 5 0 1  
7 1.16 1.36 72.5 -0.82 -0.22 12.9 76 4 7 7 8 5 2 1  
8 1.75 3.02 74.6 -1.18 -0.29 17.2 79 8 7 7 6 5 0 1  
9 1.73 3.05 75.4 -1.45 -0.40 14.9 78 5 7 13 6 6 0 1  
10 1.58 1.58 79.7 -1.66 -0.43 21.1 80 8 6 9 7 6 0 1  
11 1.18 2.29 81.0 -0.98 -0.14 16.7 72 7 5 7 8 9 3 1  
12 1.23 2.26 87.5 -1.26 -0.21 17.9 75 7 6 12 11 7 3 0  
13 1.31 1.29 91.5 -1.28 -0.30 16.2 77 6 10 9 8 8 0 2  
14 1.20 2.33 109.3 -1.23 -0.15 18.7 73 11 7 12 10 9 3 1  
15 1.24 1.43 113.9 -0.87 -0.16 18.3 82 12 10 9 16 10 1 1  
16 1.71 2.77 133.4 -1.29 -0.43 9.1 79 5 5 17 8 7 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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