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PDBsum entry 8h77

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Pore analysis for: 8h77 calculated with MOLE 2.0 PDB id
8h77
Pores calculated on whole structure Pores calculated excluding ligands

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23 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.38 1.73 35.4 0.14 0.09 14.6 86 4 2 0 5 1 0 0  
2 1.34 1.45 37.5 0.44 0.65 16.2 74 5 1 0 6 4 0 1  
3 1.29 2.51 39.1 1.88 0.99 8.0 74 2 2 0 9 4 0 1  
4 1.74 3.77 44.5 -2.11 -0.48 26.4 81 5 8 5 3 2 0 1  
5 3.18 3.57 45.9 -1.52 -0.20 28.7 78 8 3 2 4 0 0 0  
6 1.28 1.28 50.6 -1.38 -0.41 22.2 82 7 7 5 2 0 0 2  
7 3.16 3.48 56.4 -2.64 -0.37 39.0 79 12 4 3 3 0 0 0  
8 3.53 5.27 68.0 -2.71 -0.68 30.3 86 8 6 5 1 0 0 0  
9 1.40 1.73 78.1 -2.37 -0.54 26.9 87 9 7 6 3 1 1 0  
10 1.51 2.14 83.1 -0.46 -0.05 14.8 78 5 4 2 8 3 1 1  
11 1.54 1.97 87.4 -1.00 -0.39 12.4 77 4 6 6 5 5 3 0  
12 1.38 1.73 91.0 -2.39 -0.52 29.3 85 12 6 3 3 0 0 0  
13 1.40 1.74 96.7 -0.73 -0.26 12.9 84 7 6 5 5 3 0 0  
14 1.54 2.02 100.1 -1.31 -0.40 14.3 81 4 5 9 6 4 2 0  
15 1.36 1.73 102.7 0.41 0.04 7.0 78 3 4 4 10 6 1 0  
16 1.26 1.54 104.1 -2.09 -0.58 27.6 82 10 8 7 5 2 1 0  
17 1.57 2.23 108.0 -0.49 -0.09 13.5 76 5 4 4 8 5 2 1  
18 1.30 1.73 129.6 -1.35 -0.32 17.5 81 11 5 8 9 4 2 0  
19 1.73 1.90 134.2 -2.10 -0.50 26.5 81 10 11 5 4 2 2 0  
20 1.73 2.16 138.6 -1.19 -0.25 18.7 81 9 7 8 10 2 2 1  
21 1.60 2.26 159.9 -0.97 -0.24 16.3 81 14 8 7 14 3 1 1  
22 1.18 1.51 168.0 -1.24 -0.21 20.5 82 16 7 8 13 2 2 1  
23 1.37 1.58 173.3 -1.88 -0.41 23.1 83 16 15 12 5 5 3 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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