 |
PDBsum entry 8a8h
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 8a8h calculated with MOLE 2.0
|
PDB id
|
|
|
|
8a8h
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
2 pores,
coloured by radius |
 |
3 pores,
coloured by radius
|
3 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.21 |
2.73 |
61.9 |
-1.26 |
-0.35 |
21.1 |
87 |
 |
5 |
5 |
5 |
2 |
2 |
1 |
0 |
 |
PO4 204 C
|
 |
 |
2 |
 |
1.12 |
1.24 |
52.4 |
-1.63 |
-0.08 |
22.4 |
81 |
6 |
3 |
3 |
5 |
2 |
0 |
0 |
EDO 302 A EDO 303 A EDO 304 A EDO 305 A
|
 |
3 |
 |
1.13 |
1.24 |
57.4 |
-0.85 |
0.02 |
14.8 |
85 |
4 |
4 |
4 |
4 |
3 |
1 |
0 |
EDO 302 A EDO 304 A EDO 305 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |