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PDBsum entry 7fjs

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 7fjs calculated with MOLE 2.0 PDB id
7fjs
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.62 2.42 28.7 -1.07 -0.44 16.2 85 2 2 3 2 1 2 0  
2 3.78 3.80 33.8 -1.45 -0.70 14.1 89 3 2 3 1 0 2 0  
3 1.70 1.69 50.2 -1.33 -0.78 11.5 96 2 3 5 0 0 2 0  
4 2.82 2.82 55.2 -1.97 -0.72 20.2 88 3 4 7 1 2 1 0  
5 2.73 2.79 67.3 -1.45 -0.48 17.0 88 9 5 9 6 1 1 0  
6 1.42 2.90 91.4 -1.18 -0.71 10.7 89 4 4 7 4 0 2 0  
7 2.49 3.47 93.2 -1.89 -0.50 20.4 83 7 4 5 1 3 3 0  
8 2.05 2.22 99.9 -1.64 -0.54 17.9 88 10 5 8 3 2 2 0  
9 2.73 2.81 106.9 -1.52 -0.57 17.9 87 7 8 12 5 3 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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