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PDBsum entry 6zoh

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Pore analysis for: 6zoh calculated with MOLE 2.0 PDB id
6zoh
Pores calculated on whole structure Pores calculated excluding ligands

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31 pores, coloured by radius 28 pores, coloured by radius 28 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.61 2.84 27.5 -0.92 -0.36 12.8 82 2 3 4 3 2 0 0  
2 1.83 2.00 34.0 -2.89 -0.56 32.2 87 7 5 2 2 0 0 0  
3 1.15 2.84 44.2 -0.51 -0.54 2.8 87 0 1 4 4 2 1 0  
4 2.17 3.20 46.1 -1.58 -0.55 20.3 81 6 4 4 2 1 1 0  
5 1.30 1.30 49.1 -1.49 -0.55 13.4 84 3 5 9 5 2 0 0  
6 1.50 2.07 49.3 -2.07 -0.69 22.4 81 4 5 4 2 0 0 0  
7 1.22 1.27 50.8 -1.64 -0.50 12.7 83 4 2 9 3 1 0 0  
8 1.20 1.21 55.1 -1.05 -0.49 11.0 86 4 3 9 6 1 0 0  
9 1.30 1.35 57.7 -1.70 -0.72 13.6 91 2 4 7 3 1 1 0  
10 1.50 2.07 57.7 -2.31 -0.70 25.9 81 4 8 4 2 1 0 0  
11 1.85 2.14 60.5 -0.65 -0.34 11.6 83 2 6 3 5 3 4 0  3YI 1107 B
12 1.52 1.52 61.0 -1.69 -0.54 11.8 82 3 4 10 3 3 3 0  GOL 1112 C
13 3.48 3.65 61.7 -1.32 -0.50 15.7 86 3 5 6 4 1 4 0  
14 1.21 2.93 66.0 -0.68 -0.18 9.6 75 2 4 3 5 4 4 0  3YI 1107 B
15 1.48 1.48 67.7 -1.70 -0.64 16.8 85 5 6 10 4 1 1 0  
16 1.22 2.84 69.0 -0.21 0.00 6.4 75 1 3 5 6 8 1 0  
17 1.18 2.90 75.4 -0.60 -0.18 8.2 77 3 4 10 8 7 2 0  
18 1.53 1.52 80.0 -1.17 -0.40 11.8 83 4 6 13 6 3 4 0  3YI 1107 B
19 1.31 1.33 79.8 -0.96 -0.35 9.3 85 2 5 11 5 3 5 0  3YI 1107 B
20 1.51 3.06 87.6 -0.53 -0.41 10.5 86 2 4 10 9 2 3 0  D12 1205 A
21 1.47 1.47 106.6 -1.25 -0.51 12.8 84 4 8 15 11 3 3 0  D12 1205 A GOL 1112 C LMT 1113 C
22 1.41 2.46 107.9 -1.82 -0.49 21.2 83 10 7 7 5 4 2 0  3YI 1107 B
23 1.41 3.07 110.2 -0.39 -0.33 9.3 87 3 4 10 10 3 3 0  D12 1205 A
24 1.44 3.11 111.9 -0.80 -0.41 13.9 81 4 7 5 8 3 1 0  D12 1205 A LMT 1113 C
25 1.28 1.49 117.0 -1.43 -0.42 13.2 86 8 7 19 6 5 0 0  EDO 1203 A 3YI 1210 A
26 1.91 2.01 124.1 -1.02 -0.54 13.8 86 4 11 8 8 4 3 0  3YI 1210 A
27 2.02 2.10 123.2 -0.85 -0.44 13.1 85 5 10 7 6 5 2 0  3YI 1210 A
28 2.03 3.20 40.7 -2.21 -0.48 27.7 77 6 4 2 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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