spacer
spacer

PDBsum entry 6z4z

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 6z4z calculated with MOLE 2.0 PDB id
6z4z
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.96 1.96 26.3 0.78 0.10 8.7 74 2 3 1 5 2 0 0  PQ5 502 C
2 3.08 3.62 30.5 -2.60 -0.43 36.1 85 8 4 0 2 0 0 0  
3 1.70 4.71 40.1 0.53 -0.05 9.2 72 2 2 1 4 2 0 0  PQ5 502 C
4 2.12 2.94 47.3 -2.81 -0.39 37.7 82 12 4 1 2 1 0 0  PO4 501 A PO4 503 A
5 2.52 2.55 74.5 -2.03 -0.55 25.8 91 14 7 5 4 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer