PDBsum entry 6x9h

Pore analysis for: 6x9h calculated with

MOLE 2.0

PDB id

6x9h

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

7 pores, coloured by radius

12 pores, coloured by radius

12 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.42

1.82

26.5

1.05

0.28

6.3

78

2

2

0

6

2

0

0

2

1.61

2.30

32.5

-0.77

-0.24

20.6

80

2

5

1

4

1

0

0

3

1.73

1.81

34.5

-0.58

-0.38

17.6

91

1

5

2

7

0

0

0

4

1.57

2.51

45.1

-1.29

-0.19

21.1

78

5

5

3

6

2

2

0

5

1.50

1.51

73.3

-1.12

-0.44

17.7

87

3

6

4

6

1

1

0

NAG 501 A

6

1.48

1.52

86.6

-1.91

-0.64

25.3

83

6

12

5

9

0

0

0

7

1.46

1.45

90.6

-1.40

-0.41

18.1

76

5

8

4

5

4

0

0

8

1.73

1.88

92.8

-1.62

-0.50

23.1

82

6

14

7

10

0

0

1

9

2.11

2.90

99.7

-2.12

-0.71

25.5

84

4

12

7

6

1

1

0

NAG 501 A

10

1.47

1.92

106.3

-0.05

-0.06

13.3

79

5

9

2

11

3

1

1

11

1.72

1.88

128.6

-1.65

-0.52

22.0

82

6

16

9

10

1

1

1

NAG 501 A

12

1.65

3.77

128.6

-1.54

-0.36

21.4

77

7

12

6

6

4

2

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.