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PDBsum entry 6wp5

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6wp5 calculated with MOLE 2.0 PDB id
6wp5
Pores calculated on whole structure Pores calculated excluding ligands

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15 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.82 3.06 26.0 -1.22 -0.67 14.3 93 4 2 3 3 0 0 0  
2 1.13 1.58 26.3 -1.00 -0.44 14.4 82 3 2 2 4 1 0 0  
3 1.28 1.27 29.4 0.92 0.05 7.6 84 2 1 0 9 0 1 0  
4 1.25 1.43 37.1 -1.47 -0.51 22.3 82 4 5 3 5 1 0 0  
5 1.26 2.35 46.7 -1.19 -0.12 21.4 79 6 2 2 8 2 0 1  
6 1.31 3.62 65.2 -0.12 0.28 16.7 80 10 5 4 9 4 0 0  
7 1.39 3.05 65.8 -0.22 0.25 17.3 78 9 4 4 8 4 0 1  
8 1.50 2.30 66.1 -0.27 0.17 15.8 76 8 3 4 9 5 0 1  
9 1.24 1.44 69.1 -0.40 0.11 14.9 75 9 5 4 7 5 1 0  
10 1.22 2.13 94.0 -0.92 -0.11 19.9 77 6 6 2 8 3 2 1  
11 1.21 1.48 108.9 -1.45 -0.17 22.8 80 15 7 6 9 4 2 0  
12 1.23 1.37 133.0 -2.12 -0.48 23.4 85 15 7 10 9 0 2 1  
13 1.29 1.34 174.7 -1.40 -0.29 18.5 80 19 11 13 10 5 3 0  
14 1.26 1.37 215.8 -1.04 -0.17 18.8 80 20 13 12 15 6 3 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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