PDBsum entry 6vqb Go to PDB code:  Pore analysis for: 6vqb calculated with MOLE 2.0 PDB id 6vqb Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.59 2.81 42.8 -1.52 -0.39 20.1 82 6 4 4 4 2 0 0   2 1.98 1.99 47.0 -2.30 -0.67 30.8 86 6 5 3 2 1 0 0   3 2.48 2.48 49.0 -1.97 -0.55 27.9 84 8 5 2 4 1 0 0   4 1.74 2.11 53.8 -2.18 -0.42 28.6 79 7 3 2 2 3 0 0   5 1.16 1.16 56.2 -0.52 0.01 17.4 78 6 2 4 10 2 0 0   6 1.18 1.18 63.6 -0.67 -0.19 20.0 79 6 4 2 11 1 0 0   7 1.74 2.11 65.0 -2.42 -0.55 28.0 81 9 4 5 2 2 0 0   8 1.17 1.17 65.5 -0.84 -0.28 20.2 82 6 5 5 10 0 0 0   9 1.91 2.32 69.7 -2.12 -0.58 21.1 83 8 8 9 7 0 2 0   10 1.92 2.32 70.7 -2.20 -0.65 28.0 85 9 7 5 5 0 0 0   11 2.58 3.27 73.9 -2.21 -0.31 27.5 86 10 5 8 7 1 1 0   12 2.70 2.74 79.0 -2.11 -0.57 24.3 86 9 9 6 6 0 1 0   13 2.57 3.20 79.4 -2.23 -0.49 22.8 86 8 7 12 6 2 1 0   14 2.24 2.34 104.6 -1.69 -0.31 24.2 85 14 7 8 10 1 2 0   15 1.44 2.04 130.5 -1.76 -0.42 21.7 83 12 9 10 7 3 3 0   16 1.89 2.65 137.8 -1.55 -0.48 20.0 85 11 12 7 13 2 3 0   17 1.15 2.09 158.9 -1.92 -0.47 24.7 85 14 13 9 8 2 3 0   18 1.58 2.12 160.0 -1.95 -0.33 27.3 80 18 10 9 5 4 1 0   19 1.44 1.51 173.8 -1.89 -0.50 20.9 83 15 15 13 7 7 4 0   20 2.09 2.24 179.6 -2.08 -0.55 25.8 84 21 17 6 8 3 3 0   21 2.41 3.33 190.5 -2.76 -0.61 26.6 82 18 21 18 4 4 4 0   22 1.18 2.00 214.3 -2.35 -0.54 30.6 85 26 17 11 7 2 2 0   23 1.84 2.91 219.7 -2.21 -0.49 29.1 83 28 19 9 7 4 2 0   24 1.44 2.07 224.9 -2.05 -0.45 27.8 85 26 15 17 11 2 1 0   25 2.65 3.72 235.6 -2.11 -0.48 23.1 80 23 22 17 11 8 6 0   26 1.90 3.93 252.9 -2.34 -0.56 30.6 86 32 20 13 10 1 1 0   27 1.30 1.34 267.4 -1.78 -0.42 27.1 83 26 19 11 19 2 2 0   28 2.04 2.82 288.2 -2.24 -0.44 22.3 81 26 20 20 12 8 7 0   29 1.60 1.85 301.1 -1.95 -0.51 18.8 85 18 15 23 12 4 3 0   30 2.56 4.27 298.9 -1.95 -0.42 24.6 83 30 25 24 23 6 4 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.