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PDBsum entry 6v0r
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Pore analysis for: 6v0r calculated with  MOLE 2.0
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PDB id
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6v0r
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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12 pores,
coloured by radius |
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17 pores,
coloured by radius
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17 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.41 |
1.45 |
32.9 |
-0.25 |
-0.15 |
10.8 |
82 |
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2 |
1 |
4 |
6 |
2 |
1 |
0 |
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2 |
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1.41 |
1.45 |
32.9 |
-0.25 |
-0.15 |
10.8 |
82 |
2 |
1 |
4 |
6 |
2 |
1 |
0 |
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3 |
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2.61 |
4.54 |
73.5 |
-2.94 |
-0.59 |
28.5 |
81 |
14 |
3 |
6 |
2 |
0 |
4 |
0 |
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4 |
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2.58 |
4.56 |
79.5 |
-2.79 |
-0.62 |
26.0 |
82 |
14 |
3 |
7 |
3 |
0 |
3 |
0 |
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5 |
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2.62 |
4.51 |
79.5 |
-2.76 |
-0.63 |
25.3 |
81 |
14 |
3 |
7 |
3 |
0 |
4 |
0 |
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6 |
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2.58 |
4.57 |
94.4 |
-3.13 |
-0.57 |
31.8 |
81 |
16 |
5 |
10 |
3 |
0 |
2 |
0 |
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7 |
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2.58 |
4.55 |
95.4 |
-3.22 |
-0.59 |
32.7 |
81 |
16 |
5 |
10 |
3 |
0 |
2 |
0 |
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8 |
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1.22 |
1.90 |
100.1 |
-1.62 |
-0.39 |
21.0 |
84 |
6 |
6 |
8 |
7 |
1 |
2 |
1 |
NAG 611 A NAG 1 J NAG 2 J
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9 |
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1.39 |
1.83 |
113.2 |
-1.37 |
-0.39 |
18.3 |
86 |
7 |
7 |
10 |
7 |
1 |
2 |
1 |
NAG 611 D NAG 1 b NAG 2 b
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10 |
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1.39 |
1.83 |
113.2 |
-1.37 |
-0.39 |
18.3 |
86 |
7 |
7 |
10 |
7 |
1 |
2 |
1 |
NAG 611 C NAG 1 S NAG 2 S
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11 |
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2.54 |
4.55 |
141.0 |
-3.01 |
-0.54 |
33.6 |
83 |
19 |
8 |
11 |
4 |
0 |
2 |
0 |
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12 |
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2.54 |
4.55 |
141.0 |
-3.00 |
-0.55 |
33.4 |
83 |
19 |
8 |
11 |
4 |
0 |
2 |
0 |
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13 |
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1.17 |
1.92 |
151.6 |
-1.88 |
-0.38 |
26.1 |
82 |
13 |
7 |
9 |
6 |
1 |
3 |
2 |
NAG 611 D NAG 1 b NAG 2 b BMA 3 b MAN 4 b MAN 5 b
MAN 6 b
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14 |
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1.17 |
1.92 |
151.6 |
-1.88 |
-0.38 |
26.1 |
82 |
13 |
7 |
9 |
6 |
1 |
3 |
2 |
NAG 611 A NAG 1 J NAG 2 J BMA 3 J MAN 4 J MAN 5 J
MAN 6 J
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15 |
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1.56 |
1.85 |
151.4 |
-1.89 |
-0.43 |
24.0 |
82 |
13 |
6 |
10 |
7 |
1 |
3 |
2 |
NAG 611 C NAG 1 S NAG 2 S BMA 3 S MAN 4 S MAN 5 S
MAN 6 S
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16 |
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1.36 |
1.91 |
159.3 |
-1.81 |
-0.42 |
22.1 |
79 |
17 |
4 |
8 |
6 |
2 |
6 |
2 |
NAG 611 C NAG 1 S NAG 2 S BMA 3 S MAN 4 S MAN 5 S
MAN 6 S
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17 |
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1.25 |
1.90 |
165.6 |
-1.88 |
-0.42 |
23.0 |
79 |
17 |
5 |
8 |
6 |
2 |
6 |
2 |
NAG 611 D NAG 1 b NAG 2 b BMA 3 b MAN 4 b MAN 5 b
MAN 6 b
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program