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PDBsum entry 6tug

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 6tug calculated with MOLE 2.0 PDB id
6tug
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.28 64.3 -1.28 0.09 25.9 81 14 4 3 8 3 1 0  SO4 504 B
2 1.18 1.28 79.7 -1.56 0.08 27.2 80 15 4 3 7 3 1 0  SO4 504 B
3 1.19 2.31 84.8 -0.46 0.29 21.2 81 13 1 4 12 4 1 0  SO4 504 B
4 1.13 3.15 24.2 0.08 0.21 14.9 94 2 1 3 4 0 0 0  
5 1.19 1.19 29.7 -0.40 0.25 17.3 80 2 1 2 4 3 0 0  
6 1.19 1.19 32.3 -0.02 0.31 9.4 79 1 1 3 3 3 0 0  
7 1.22 2.10 21.4 2.80 0.99 0.6 67 0 0 1 7 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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