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PDBsum entry 6tnt

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Pore analysis for: 6tnt calculated with MOLE 2.0 PDB id
6tnt
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.35 54.5 -2.44 -0.56 26.8 75 8 6 3 0 4 1 1  
2 3.54 4.93 57.2 -2.00 -0.62 11.4 83 5 4 6 1 2 3 0  
3 1.24 1.26 71.8 0.50 0.37 9.2 71 3 4 4 13 4 1 0  
4 1.15 1.58 72.2 0.24 0.08 6.9 79 3 2 6 11 2 1 0  
5 3.91 5.58 76.2 -2.39 -0.60 26.8 81 8 8 6 5 0 2 0  
6 1.82 2.43 85.6 -2.54 -0.30 30.3 80 13 8 5 6 4 2 0  
7 1.29 1.37 91.1 -1.63 -0.35 18.9 76 9 6 9 2 7 2 0  
8 1.61 3.19 93.7 -1.60 -0.36 21.9 79 8 12 8 9 3 2 0  
9 2.41 3.22 94.3 -1.68 -0.51 14.4 77 5 10 7 6 5 11 0  
10 2.07 2.09 100.5 -2.09 -0.28 23.0 85 12 4 8 3 4 1 0  
11 1.82 1.96 112.1 -1.80 -0.37 23.4 76 12 9 4 5 6 7 0  
12 1.26 1.68 117.1 -2.09 -0.26 27.1 77 15 9 7 7 8 2 0  
13 1.53 1.69 123.5 -2.14 -0.49 21.1 85 16 5 11 2 4 2 0  
14 1.44 1.37 133.9 -1.70 -0.36 17.2 78 12 10 12 10 4 9 0  
15 1.30 1.34 140.2 -1.10 -0.09 18.4 81 13 12 12 17 5 0 0  
16 2.39 2.96 166.2 -1.97 -0.59 17.6 81 11 13 15 10 4 13 0  
17 1.15 1.15 178.4 -0.97 -0.17 17.3 78 16 14 12 18 7 5 0  
18 1.30 1.39 186.6 -1.90 -0.43 24.2 76 17 17 12 7 7 5 1  
19 1.26 1.27 200.2 -0.99 -0.19 14.3 80 16 15 20 23 5 7 0  
20 2.84 3.32 193.3 -1.53 -0.36 19.6 82 14 14 15 14 1 6 0  
21 1.25 2.13 196.1 -1.90 -0.27 26.4 79 16 13 8 11 5 1 0  
22 1.74 4.04 201.5 -1.47 -0.18 19.5 81 23 9 14 13 6 2 1  
23 1.60 3.76 205.9 -1.24 -0.09 19.3 78 21 10 12 16 10 2 1  
24 2.11 1.90 209.4 -2.03 -0.44 23.3 82 19 14 18 12 6 11 0  
25 1.27 2.10 228.1 -1.07 -0.11 18.4 79 19 9 13 20 8 0 1  
26 1.31 1.37 272.6 -1.32 -0.20 21.3 78 23 15 12 20 9 6 0  
27 2.36 2.36 258.6 -1.76 -0.46 18.5 82 19 17 25 11 4 10 0  
28 1.83 2.25 323.5 -1.32 -0.31 18.9 81 19 15 16 25 5 9 0  
29 1.21 2.35 343.2 -1.30 -0.37 17.0 80 23 20 28 19 7 19 0  
30 1.32 1.93 391.3 -1.05 -0.17 18.7 80 24 25 18 31 8 21 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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