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PDBsum entry 6tge

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Pore analysis for: 6tge calculated with MOLE 2.0 PDB id
6tge
Pores calculated on whole structure Pores calculated excluding ligands

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18 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.72 2.26 37.0 -1.74 -0.59 26.6 78 5 7 2 2 1 0 0  
2 2.22 2.22 54.2 -0.62 -0.28 14.9 78 3 2 1 5 2 0 0  H4M 302 E NAP 301 J H4M 302 J
3 3.37 3.55 55.4 -2.59 -0.63 30.7 78 10 5 1 1 0 0 0  H4M 302 M
4 3.56 5.11 58.1 -2.04 -0.52 29.4 76 9 4 0 4 1 1 0  H4M 302 E
5 2.26 3.92 81.0 -0.27 -0.11 12.5 81 8 3 2 10 3 2 0  NAP 301 E H4M 302 E
6 2.04 2.23 84.1 -2.10 -0.64 27.1 82 12 9 6 4 1 0 0  NAP 301 B
7 1.60 1.66 93.1 -0.71 -0.33 12.9 81 7 4 3 11 2 2 0  NAP 301 M H4M 302 M
8 1.81 1.96 96.3 -0.70 -0.23 16.1 80 8 5 2 12 2 3 0  NAP 301 F H4M 302 F
9 1.44 1.87 97.9 -1.32 -0.32 16.9 80 5 6 3 9 4 2 0  NAP 301 R H4M 302 R
10 2.72 2.72 117.2 -1.23 -0.25 20.7 79 11 9 5 11 4 0 0  NAP 301 K H4M 302 K
11 2.20 4.10 122.9 -0.86 -0.22 18.0 81 11 7 5 13 3 0 0  NAP 301 K H4M 302 K NAP 301 V
12 2.17 2.29 130.0 -1.36 -0.33 20.4 85 10 8 9 15 1 1 0  NAP 301 K NAP 301 V
13 2.16 2.28 157.6 -1.40 -0.52 20.5 86 13 10 8 12 1 1 0  NAP 301 V
14 2.69 2.68 163.1 -1.11 -0.39 19.8 82 16 12 6 13 4 0 0  NAP 301 K H4M 302 K
15 2.69 2.69 167.6 -1.76 -0.33 24.5 79 18 12 7 10 3 1 0  NAP 301 B NAP 301 K H4M 302 K
16 2.69 2.68 175.0 -1.08 -0.25 21.1 83 13 13 8 16 3 1 0  NAP 301 K H4M 302 K NAP 301 T
17 2.17 4.03 181.2 -1.50 -0.40 23.8 87 14 12 10 19 0 1 0  NAP 301 K NAP 301 T NAP 301 V
18 2.16 4.04 180.4 -1.89 -0.40 24.7 84 17 11 11 14 0 2 0  NAP 301 B NAP 301 K NAP 301 V
19 1.16 3.03 195.5 -2.29 -0.59 31.0 83 24 17 9 9 2 2 0  H4M 302 T NAP 301 W
20 2.77 2.78 215.7 -1.23 -0.33 22.0 82 20 15 8 18 4 2 0  H4M 302 E NAP 301 K H4M 302 K NAP 301 T
21 1.48 1.71 358.1 -1.29 -0.34 20.7 82 32 24 12 30 7 4 0  NAP 301 E H4M 302 E NAP 301 K H4M 302 K NAP 301 W
22 1.48 2.77 72.5 -0.64 -0.15 6.3 88 0 3 6 7 3 0 0  NAP 301 H H4M 302 H
23 2.19 3.71 175.4 -1.04 -0.23 19.4 80 9 8 5 14 5 3 0  NAP 301 G H4M 302 G NAP 301 O
24 2.43 3.03 37.4 -0.27 -0.12 7.5 82 1 1 1 7 3 1 0  NAP 301 N H4M 302 N
25 2.36 3.57 62.2 -0.14 -0.06 10.6 80 3 3 1 8 3 1 0  NAP 301 N H4M 302 N
26 1.70 1.74 28.2 -0.25 -0.12 5.7 90 1 1 2 5 1 1 0  NAP 301 X H4M 302 X
27 2.20 2.20 31.3 0.38 0.02 6.4 79 2 2 1 5 2 0 0  NAP 301 P H4M 302 P

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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