spacer
spacer

PDBsum entry 6scm

Go to PDB code: 
Top Page protein ligands pores links
Pore analysis for: 6scm calculated with MOLE 2.0 PDB id
6scm
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 1.50 28.4 -1.12 -0.28 17.4 79 4 1 3 3 1 1 1  
2 2.97 3.42 76.5 -2.76 -0.53 24.4 87 7 3 7 3 0 1 0  
3 1.27 1.49 88.4 -1.41 -0.30 20.4 81 5 4 4 5 1 2 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer