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PDBsum entry 6pad

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Cleft analysis for: 6pad PDB id
6pad
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1458.84 1.57 60.91 6 9.45 1 9.93 1 1 1 8 5 7 7 2 0PC 213[A] (20 atoms)
2 929.39 0.00 58.34 9 6.89 6 7.75 3 3 0 6 5 2 2 0  
3 789.75 0.00 64.21 5 8.90 2 8.58 2 3 2 2 5 5 2 0  
4 564.47 0.00 72.02 2 7.92 4 5.24 7 3 2 3 3 3 1 2  
5 421.88 0.00 53.02 10 8.50 3 7.39 4 2 2 2 1 0 3 1  
6 268.31 0.00 68.06 3 3.70 7 6.11 5 2 0 3 3 2 0 0  
7 267.47 0.00 59.12 8 3.38 8 4.86 10 1 1 3 1 2 3 0  
8 271.27 0.00 67.09 4 0.98 10 5.21 8 1 0 3 2 0 2 2  
9 223.59 0.00 74.04 1 7.32 5 5.86 6 1 0 5 1 2 3 0  
10 261.98 0.00 60.30 7 2.09 9 4.88 9 1 1 0 3 2 4 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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