spacer
spacer

PDBsum entry 6p9c

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6p9c calculated with MOLE 2.0 PDB id
6p9c
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.94 2.52 25.2 -0.80 -0.13 12.2 89 2 2 3 2 1 0 0  
2 1.63 3.56 48.0 -2.13 -0.32 16.3 86 6 2 6 3 2 0 0  CL 304 A
3 1.26 1.41 67.5 -0.93 -0.04 12.5 82 6 2 6 6 4 0 0  4J6 301 A CL 304 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer