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PDBsum entry 6ofh

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 6ofh calculated with MOLE 2.0 PDB id
6ofh
Pores calculated on whole structure Pores calculated excluding ligands

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20 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.08 3.87 35.2 -2.08 -0.45 11.4 90 2 0 9 3 0 1 0  
2 3.55 4.59 49.0 -2.69 -0.56 24.1 85 5 3 11 3 0 1 0  
3 2.96 2.96 57.2 0.77 0.36 13.2 77 3 4 2 12 6 0 0  
4 2.16 4.73 58.3 -0.90 -0.03 8.7 83 3 1 9 6 2 1 0  
5 2.90 3.11 58.5 0.55 0.23 9.9 77 3 4 2 11 5 0 0  
6 2.88 3.22 60.0 0.83 0.30 10.2 77 3 4 2 12 6 0 0  
7 2.86 3.08 61.6 -0.73 -0.03 19.8 78 5 5 3 11 5 0 0  
8 3.04 3.20 64.1 -0.57 -0.04 18.2 78 6 5 3 12 6 0 0  
9 3.05 3.23 65.3 0.16 0.12 12.7 78 5 5 3 12 6 0 0  
10 2.88 3.10 65.9 -0.21 0.05 14.3 78 6 5 3 11 5 0 0  
11 2.88 3.09 70.0 -0.79 -0.06 17.6 78 8 6 4 11 5 0 0  
12 2.97 3.27 70.4 -0.87 -0.09 20.6 78 8 6 4 12 6 0 0  
13 3.57 4.60 86.3 -1.64 -0.30 17.0 82 5 4 12 8 1 2 0  
14 3.57 4.59 87.4 -1.61 -0.29 13.9 86 4 5 17 6 1 2 0  
15 3.24 3.41 88.5 -2.95 -0.55 31.4 81 22 12 14 6 3 0 0  
16 2.94 2.97 92.3 -3.27 -0.61 33.8 81 24 13 15 6 3 0 0  
17 3.11 3.21 93.0 -1.01 -0.02 22.5 77 4 4 4 11 7 0 0  
18 3.09 3.26 94.1 -3.09 -0.59 32.0 80 26 14 14 6 3 0 0  
19 3.20 3.35 98.7 -3.33 -0.64 33.3 80 28 15 15 5 2 0 0  
20 3.16 3.27 103.1 -3.27 -0.62 34.0 80 30 16 16 6 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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