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PDBsum entry 6o8h
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Pore analysis for: 6o8h calculated with MOLE 2.0
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PDB id
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6o8h
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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5 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.32 |
1.46 |
28.0 |
-0.48 |
-0.25 |
12.6 |
80 |
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3 |
0 |
1 |
4 |
0 |
1 |
0 |
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DC 4 B DC 5 B DG 12 C DG 13 C DA 14 C DG 15 C
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2 |
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1.89 |
1.89 |
47.9 |
-1.07 |
-0.52 |
13.3 |
87 |
7 |
1 |
3 |
2 |
0 |
1 |
0 |
DT 7 B DC 8 B DG 9 B DC 10 B DC 6 C DT 11 C DG 12 C DG 13 C DA 14 C
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3 |
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1.35 |
1.46 |
48.8 |
-0.53 |
-0.37 |
9.2 |
85 |
4 |
0 |
2 |
5 |
0 |
0 |
0 |
DC 4 B DC 5 B DA 6 B DT 7 B DC 8 B DG 9 B DC 10 B DC 6 C DT 11 C DG 12 C DG 13 C DG 15 C
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4 |
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1.89 |
2.10 |
60.4 |
-1.14 |
-0.49 |
11.8 |
89 |
3 |
4 |
5 |
3 |
1 |
0 |
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DT 7 B DG 9 B DC 10 B DG 11 B DC 12 B DA 4 C DG 5 C DC 6 C
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5 |
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1.98 |
2.11 |
90.7 |
-1.01 |
-0.43 |
11.2 |
88 |
7 |
3 |
6 |
5 |
1 |
1 |
0 |
DT 7 B DC 8 B DG 9 B DC 10 B DG 11 B DC 12 B DA 4 C DG 5 C DT 11 C DG 12 C DG 13 C DA 14 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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