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PDBsum entry 6n2s

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Top Page protein dna_rna ligands metals tunnels links
Tunnel analysis for: 6n2s calculated with MOLE 2.0 PDB id
6n2s
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 1 tunnel, coloured by tunnel radius 1 tunnel, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.29 78.3 -1.85 -0.22 27.2 80 8 8 3 4 3 0 0  MG 401 A 1GC 405 A DG 1 D DG 9 P DC 10 P DG 7 T
DC 8 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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