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PDBsum entry 6mxr

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6mxr calculated with MOLE 2.0 PDB id
6mxr
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.51 1.61 15.4 -1.61 -0.64 19.5 94 2 1 2 0 0 1 0  
2 1.51 1.66 30.7 -1.24 -0.62 13.4 84 1 2 1 0 0 3 0  
3 1.30 1.41 16.0 -2.70 -0.29 28.6 73 4 0 0 0 1 1 0  
4 1.37 2.74 23.7 0.12 -0.40 1.8 98 0 0 8 4 1 0 0  
5 1.33 2.94 25.7 0.07 -0.42 1.8 95 0 0 8 4 2 0 0  
6 1.36 2.74 26.7 0.17 -0.39 1.9 97 0 0 7 4 1 0 0  
7 1.33 3.80 28.7 0.23 -0.36 1.8 94 0 0 7 4 2 0 0  
8 1.06 1.06 18.4 -0.24 -0.34 9.8 73 2 2 2 3 2 1 0  
9 1.06 1.07 24.0 0.08 -0.35 4.9 73 1 0 3 3 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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