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PDBsum entry 6mmt

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 6mmt calculated with MOLE 2.0 PDB id
6mmt
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.52 1.53 42.1 -0.60 -0.49 8.8 85 1 3 4 5 1 1 0  
2 1.14 2.51 45.2 -0.61 -0.40 11.5 80 2 3 4 7 2 1 0  
3 1.13 2.16 50.9 -0.53 -0.35 12.1 78 2 3 3 8 2 2 0  
4 1.26 2.30 56.1 -0.74 -0.32 12.5 82 3 2 5 7 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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