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PDBsum entry 6l6f

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 6l6f calculated with MOLE 2.0 PDB id
6l6f
Pores calculated on whole structure Pores calculated excluding ligands

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25 pores, coloured by radius 25 pores, coloured by radius 25 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.86 3.56 39.0 -0.79 -0.21 11.7 81 6 2 2 1 3 0 0  
2 1.65 1.65 41.4 -1.64 -0.39 21.4 84 3 4 2 3 0 2 0  
3 1.71 3.65 49.1 1.44 0.82 5.2 86 1 1 4 8 4 0 0  
4 3.27 3.71 51.4 -0.47 -0.29 16.4 89 5 3 6 3 1 0 0  
5 1.27 3.49 65.3 -0.85 -0.36 13.4 91 4 4 6 5 0 1 2  
6 2.33 2.71 74.5 1.55 0.86 5.0 81 2 2 4 18 8 1 0  
7 1.15 1.94 81.3 -0.21 0.03 12.8 83 6 7 5 13 5 2 0  
8 2.14 2.77 82.9 -1.79 -0.35 24.9 78 9 7 1 2 4 2 0  
9 1.18 1.43 83.8 -0.74 -0.35 13.6 86 6 5 4 6 4 0 0  
10 1.22 2.25 83.5 0.67 0.28 12.4 81 3 7 2 13 5 0 0  
11 2.84 3.52 92.7 -1.39 -0.41 16.3 86 9 6 8 3 3 2 0  
12 1.44 3.61 96.3 -0.58 -0.03 18.1 80 8 5 5 9 4 3 0  
13 1.41 1.52 98.5 -0.24 0.14 14.7 82 8 3 6 12 3 1 0  
14 1.41 1.70 113.9 -0.56 -0.05 17.2 82 9 6 7 13 3 3 0  
15 1.27 3.06 115.3 -0.28 0.13 14.7 80 8 5 6 11 4 1 0  
16 2.10 2.77 122.5 -1.82 -0.43 24.8 83 11 10 6 4 3 2 0  
17 1.42 1.42 125.3 -0.79 -0.29 15.5 82 7 11 4 7 4 4 0  
18 1.34 1.65 157.5 -0.77 -0.13 18.3 84 13 10 12 15 2 3 0  
19 1.15 1.44 164.9 -0.41 -0.07 17.6 83 8 15 8 23 5 2 0  
20 1.28 3.21 170.3 -0.65 -0.10 17.0 83 12 11 11 14 3 3 0  
21 1.21 1.21 180.1 0.01 0.20 14.8 79 13 8 6 25 10 1 0  
22 1.25 1.26 215.3 -0.26 0.03 16.0 81 15 12 11 27 9 3 0  
23 1.42 2.68 253.5 -1.53 -0.20 22.1 81 20 12 11 11 11 1 0  
24 1.26 3.29 268.1 -0.94 0.04 19.6 80 19 10 11 20 12 0 0  
25 1.23 3.35 350.8 -0.41 0.20 17.0 80 18 11 14 31 11 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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