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PDBsum entry 6itc

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Pore analysis for: 6itc calculated with MOLE 2.0 PDB id
6itc
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 22 pores, coloured by radius 22 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 2.20 34.7 -1.04 -0.32 14.7 82 3 1 3 2 1 0 0  ADP 1003 A
2 3.14 3.34 41.1 -2.45 -0.68 25.6 88 7 3 6 2 0 1 0  
3 1.45 2.53 46.4 0.97 0.16 2.7 87 1 0 6 11 1 0 0  PGV 502 Y
4 2.48 3.49 48.9 -2.15 -0.44 23.8 84 6 3 6 4 2 1 0  
5 1.33 1.47 53.0 -2.03 -0.44 24.6 81 8 7 4 3 3 0 0  
6 1.22 1.22 55.0 -0.80 -0.36 7.7 88 1 1 2 4 2 1 0  
7 2.36 2.75 60.8 -1.59 -0.25 20.5 80 8 3 5 4 5 0 0  
8 1.72 3.40 73.6 -1.21 0.07 18.0 72 8 2 3 3 8 0 0  
9 2.38 2.71 82.8 -1.78 -0.54 20.8 85 10 7 7 4 1 1 0  
10 1.93 2.51 85.6 -2.04 -0.26 21.4 75 9 3 4 3 6 0 0  
11 2.38 2.76 87.4 -1.77 -0.28 23.4 86 8 7 6 6 2 0 0  
12 1.17 1.42 93.6 -1.07 -0.20 15.3 85 6 4 10 9 5 1 0  
13 2.36 2.78 96.0 -2.03 -0.52 22.6 84 12 7 8 6 2 2 0  
14 2.39 2.57 107.1 -1.80 -0.33 23.6 83 13 7 10 9 6 2 0  
15 1.17 1.44 119.2 -0.67 -0.22 6.6 83 1 2 6 4 4 3 0  
16 1.72 3.42 126.6 -1.64 -0.05 23.0 79 11 7 6 8 7 0 0  
17 1.83 3.44 128.7 -1.65 -0.26 20.0 79 15 7 8 6 6 1 0  
18 1.29 1.56 128.0 -1.88 -0.42 24.4 84 12 10 10 7 5 1 0  
19 1.97 2.09 133.4 -1.90 -0.28 21.9 80 16 6 9 8 7 2 0  
20 1.13 1.43 140.3 -0.40 -0.13 15.1 87 7 7 9 17 2 1 0  PGV 502 Y
21 2.39 2.55 145.7 -1.60 -0.47 19.2 86 13 10 14 10 2 3 0  
22 1.29 1.56 161.4 -1.72 -0.52 21.9 86 13 12 11 7 1 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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